Ontology meeting 2020-11-23: Difference between revisions
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(Created page with "=Present= Pascale, David, Peter, Harold, Karen, Kimberly, Jim, Chris Regrets: =Group members= Pascale, Karen, Harold, Peter, Jim, Tanya, Kimberly, David, Chris, Paul =A...") |
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= | =Attendees= | ||
Pascale, | * '''Group members:''' Pascale, Karen, Harold, Peter, Jim, Tanya, Kimberly, David, Chris, Paul | ||
* '''Present:''' | |||
* '''Regrets:''' | |||
=Agenda= | |||
= | ===Compound functions=== | ||
* Came up during the GO-CAM jamboree | |||
Summary of ticket: https://docs.google.com/presentation/d/1AYJ0cN6XK3j4_enDP0tN8MFBpurFeZ8_w6TH_yMaDKM/edit#slide=id.ga23a5b75aa_0_6 | |||
Main ticket: https://github.com/geneontology/go-ontology/issues/16972 | |||
+ many other tickets complain about the un-intuitiveness of has_part | |||
= | * '''Chris's slides: Issues with overloading is_a:''' https://docs.google.com/presentation/d/1vNYXf90vysO-pcTkeRg3YaoauUV1rWz1r9ZPIdjDmnY/edit#slide=id.p | ||
* '''Pascale's slides: summary of the ticket #16972 and possible solutions discussed recently''': https://docs.google.com/presentation/d/1AYJ0cN6XK3j4_enDP0tN8MFBpurFeZ8_w6TH_yMaDKM/edit#slide=id.p | |||
* '''List of compound functions: 2 is_a parents''' (queried by Jim): https://docs.google.com/spreadsheets/d/1S59bhCydPpseSbD3mRuKVIWaa5VIghwd93zXsItWUKE/edit#gid=218215569 | |||
===Sequence Ontology in go-lego (for Noctua)=== | |||
https://github.com/geneontology/go-ontology/issues/20419 | |||
== Other Business == | == Other Business == |
Latest revision as of 08:31, 30 November 2020
Attendees
- Group members: Pascale, Karen, Harold, Peter, Jim, Tanya, Kimberly, David, Chris, Paul
- Present:
- Regrets:
Agenda
Compound functions
- Came up during the GO-CAM jamboree
Summary of ticket: https://docs.google.com/presentation/d/1AYJ0cN6XK3j4_enDP0tN8MFBpurFeZ8_w6TH_yMaDKM/edit#slide=id.ga23a5b75aa_0_6
Main ticket: https://github.com/geneontology/go-ontology/issues/16972 + many other tickets complain about the un-intuitiveness of has_part
- Chris's slides: Issues with overloading is_a: https://docs.google.com/presentation/d/1vNYXf90vysO-pcTkeRg3YaoauUV1rWz1r9ZPIdjDmnY/edit#slide=id.p
- Pascale's slides: summary of the ticket #16972 and possible solutions discussed recently: https://docs.google.com/presentation/d/1AYJ0cN6XK3j4_enDP0tN8MFBpurFeZ8_w6TH_yMaDKM/edit#slide=id.p
- List of compound functions: 2 is_a parents (queried by Jim): https://docs.google.com/spreadsheets/d/1S59bhCydPpseSbD3mRuKVIWaa5VIghwd93zXsItWUKE/edit#gid=218215569
Sequence Ontology in go-lego (for Noctua)
https://github.com/geneontology/go-ontology/issues/20419
Other Business
https://github.com/geneontology/go-ontology/projects/1