Ontology meeting 2021-08-30

• Group members: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul
• Present:
• Regrets:

Announcement

No calls next 2 weeks - labor day + no GO calls week

Agenda

Report on transcription workshop last week

Colin, Val, Pascale, Ruth, Helen https://docs.google.com/document/d/1dO04FTcWBkWBQaBYJLjmkTTDZvEJTSezXaK9c--RTFU/edit#heading=h.can1sflfx9fi

Make sure unintended inferences don't appear in go-gaf (and maybe go-lego)

https://github.com/geneontology/go-ontology/issues/22051

Ontology editors documentation

• Review new term creation documentation: Guidelines_for_new_Molecular_Functions and Principles_for_creating_a_GO_term
• Review cross-reference documentation: Guidelines_for_'database_cross_references'_and_'definition_database_cross_references'
• Review protein binding term documentation http://wiki.geneontology.org/index.php/Guidelines_for_new_Binding_terms
• Optional: Review Chris's slides on aligning editor/contributor docs across all of OBO: https://docs.google.com/presentation/d/1YyWYSetDML3nhNgMUmcrsw80Xx1Uf1n1dWI-A20PMa8/edit#slide=id.p

• NAD/NADP: do we keep a grouping term even if all annotations can be classified to NAD or NADP-dependent? for eg GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P) activity] - all known enzymes have known specificity, see review ticket
  • added 'do not annotate'
  • DECISION (last call): This is what we will do
  • Need to add to documentation

Imports PRs

• Someone please take a quick look at [CHEBI https://github.com/geneontology/go-ontology/pull/21894] and [CL https://github.com/geneontology/go-ontology/pull/21767] PRs

Other Business

https://github.com/geneontology/go-ontology/projects/1