Panther ID:10046: Difference between revisions

Revision as of 16:30, 29 July 2009

MOD annotation done via jamboree on Feb. 2009.

Propagation:

Up-propagation to common ancestor node AN80, down-propagation to the following Ref Genome proteins:

MOUSE_MGI:1914137

RAT_1305466

CHICK_415740

DANRE_ZDB-GENE-041212-1

CAEEL_WBGENE00013541

ARATH_LOCUS NP_568675

ECOLI_G6493-MONOMER P75867 because of positive experimental annotations to HUMAN_ENSG00000102910 and ECOLI_EG10542_MONOMER P0A9M0.

@@ Line 1: / Line 1: @@
 == LONP1 ==
+==== Summary ====
 MOD annotation done via [http://gowiki.tamu.edu/wiki/index.php/RefGenome_Electronic_Jamboree_2009-02_LONP1 jamboree] on Feb. 2009.
@@ Line 5: / Line 7: @@
 [http://ppod.princeton.edu/cgi-bin/ppod.cgi/GO0/ORTHOMCL660 PPOD/OrthoMCL link]
-'''Function'''
+==== Molecular Function:  ====
-According to the jamboree wiki above, human, yeast, and E coli (P0A9M0, IDA) are annotated to ATP-dependent peptidase activity, with experimental evidence.  On the basis of these annotations, up-propagated to xx and down propagated to the following species:
+Propagation:
+===== 1) peptidase activity (GO:8233) =====
+Up-propagation to common ancestor node AN80, down-propagation to the following Ref Genome proteins:
+MOUSE_MGI:1914137
+RAT_1305466
+CHICK_415740
+DANRE_ZDB-GENE-041212-1
+CAEEL_WBGENE00013541
-Note:  the annotations in PANTHER/PAINT do not contain all the annotations from the jamboree (eg. E coli P0A9M0 is not annotated in PANTHER).
+ARATH_LOCUS NP_568675
+ECOLI_G6493-MONOMER P75867
+because of positive experimental annotations to HUMAN_ENSG00000102910 and ECOLI_EG10542_MONOMER P0A9M0.
 ----
 Back to [[GAFs_for_trees-based_annotations]]