Panther ID:10046: Difference between revisions
Karadolinski (talk | contribs) (→(GO:)) |
Karadolinski (talk | contribs) (→(GO:)) |
||
Line 57: | Line 57: | ||
==== Biological Process: ==== | ==== Biological Process: ==== | ||
===== (GO:) ===== | ===== cellular protein catabolic process (GO:0044257) ===== | ||
Note: this is a parent of the direct annotations, so could not produce a GAF file. | |||
Up-propagation to common ancestor node An4, down-propagation to the following Ref Genome proteins: | Up-propagation to common ancestor node An4, down-propagation to the following Ref Genome proteins: |
Revision as of 15:06, 31 July 2009
LONP1
Summary
MOD annotation done via jamboree on Feb. 2009.
Molecular Function: DONE
Propagation:
1) peptidase activity (GO:8233)
Up-propagation to common ancestor node AN80, down-propagation to the following Ref Genome proteins:
MOUSE_MGI:1914137
RAT_1305466
CHICK_415740
DANRE_ZDB-GENE-041212-1
CAEEL_WBGENE00013541
ARATH_LOCUS NP_568675
ECOLI_G6493-MONOMER P75867
because of positive experimental annotations to HUMAN_ENSG00000102910 and ECOLI_EG10542_MONOMER P0A9M0.
2) ATP-dependent peptidase activity (GO:0004176)
Up-propagation to common ancestor node AN4, down-propagation to the following Ref Genome proteins:
CHICK_768942
DANRE_ENSDARG00000071674
CAEEL_WBGENE00007378
CAEEL_WBGENE00011264
CAEEL_WBGENE00015614
CAEEL_WBGENE00018496
CAEEL_WBGENE00016391
DROME_FBGN0036892
SCHPO_SPAC22F3.06C
because of positive experimental annotations to HUMAN_ENSG00000196365, RAT_621598, YEAST_S000000118 PIM1 and MOUSE_MGI:1921392.
Biological Process:
cellular protein catabolic process (GO:0044257)
Note: this is a parent of the direct annotations, so could not produce a GAF file.
Up-propagation to common ancestor node An4, down-propagation to the following Ref Genome proteins:
because of positive experimental annotations to
Cellular Component: DONE
mitochondrion (GO:0005739)
Up-propagation to common ancestor node AN2, down-propagation to the following Ref Genome proteins:
CHICK_768942
DANRE_ENSDARG00000071674
CAEEL_WBGENE00016391
DROME_FBGN0036892
because of positive experimental annotations to HUMAN_ENSG000000196365, MOUSE_MGI:1921392, RAT_621598, YEAST_S000000118 (PIM1), SCHPO_SPAC22F3.06C, ARATH_LOCUS NP_566258, ARATH_LOCUS 566259, ARATH_LOCUS 568490.
Back to GAFs_for_trees-based_annotations