Difference between revisions of "Panther ID:11014"

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*[http://ppod.princeton.edu/paint/full_gafs/PTHR11014.gaf PAINT-produced GAF]
*[http://ppod.princeton.edu/paint/dag_img/11014.png Graph]
*[http://ppod.princeton.edu/paint/tables/11014.gaf_terms.html Arranged by term]
*[http://ppod.princeton.edu/paint/tables/11014terms_combined.html Arranged by gene product]

Revision as of 09:25, 10 November 2009


This is a GAF file containing suggested annotations for the CPS1 family of proteins (PTHR11014) produced by protein family annotators using the PANTHER method, June 2009. It is an Excel worksheet with Autofilter turned on and the splitscreen frozen to show a header row.

There are 2 types of annotations:

  • Up-propagation (in boldface): Annotations to hypothetical ancestral proteins showing a consensus parental GOID (column E) and the proteins on which these annotations are based (column H).
  • Down-propagation (in plaintext, following the corresponding up-propagation): Annotations to real proteins based on their descent from the hypothetical ancestors (column H).

This file contains suggested annotations for all RefGenome organisms. There are 3 up-propagations and 109 down-propagations spanning 3 unique GO terms.

CPS1 node 171.png Cps1 an171 annotations.png

Back to GAFs_for_trees-based_annotations