Panther ID:11829: Difference between revisions
Karadolinski (talk | contribs) |
Karadolinski (talk | contribs) |
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SourceForge notes: | SourceForge notes: | ||
DNA binding - human IDA, mouse ISS | DNA binding - human IDA, mouse ISS | ||
Seq-spec and ds DNA binding - rat IDA - ISS to human and mouse? | Seq-spec and ds DNA binding - rat IDA - ISS to human and mouse? | ||
TF activity - human IDA, Rat ISS - ISS to mouse? | TF activity - human IDA, Rat ISS - ISS to mouse? | ||
Transcription repressor activity - Rat IDA, mouse ISS - ISS to Human? | Transcription repressor activity - Rat IDA, mouse ISS - ISS to Human? | ||
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==== Cellular Component: ==== | ==== Cellular Component: ==== | ||
SourceForge notes: | |||
Nucleus (human, rat) - ISS to mouse? | |||
Mouse has no component annotation | |||
==== Biological Process: ==== | ==== Biological Process: ==== | ||
SourceForge notes: | |||
Both -ve and +ve regulation of transcription terms are present, but from | |||
looking at papers this seems OK. | |||
-ve regulation of transcription - rat IDA, mouse ISS - ISS to human? | |||
+ve regulation of transcription human IDA, rat ISS - ISS to mouse? | |||
Thyroid gland development (human IMP, mouse IMP, rat ISS) | |||
Hard palate development - human IMP, rat ISS - ISS to mouse? | |||
Soft palate development - human IMP, rat ISS - ISS to mouse? | |||
cell migration - mouse IMP, rat ISS - ISS to human? | |||
embryonic organ and hair follicle morphogenesis terms - Mouse IMP, rat ISS | |||
- ISS to human? | |||
thyroid hormone generation - mouse IMP, rat ISS - ISS to human? | |||
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Back to [[GAFs_for_trees-based_annotations]] | Back to [[GAFs_for_trees-based_annotations]] |
Revision as of 14:44, 3 August 2009
FOXE1/Forkhead/Forkhead box family
Summary
Molecular Function:
SourceForge notes: DNA binding - human IDA, mouse ISS
Seq-spec and ds DNA binding - rat IDA - ISS to human and mouse?
TF activity - human IDA, Rat ISS - ISS to mouse?
Transcription repressor activity - Rat IDA, mouse ISS - ISS to Human?
Propagation:
1) activity (GO:)
Up-propagation to common ancestor node AN, down-propagation to the following Ref Genome proteins:
because of positive experimental annotations to
Cellular Component:
SourceForge notes:
Nucleus (human, rat) - ISS to mouse?
Mouse has no component annotation
Biological Process:
SourceForge notes: Both -ve and +ve regulation of transcription terms are present, but from looking at papers this seems OK.
-ve regulation of transcription - rat IDA, mouse ISS - ISS to human?
+ve regulation of transcription human IDA, rat ISS - ISS to mouse?
Thyroid gland development (human IMP, mouse IMP, rat ISS)
Hard palate development - human IMP, rat ISS - ISS to mouse?
Soft palate development - human IMP, rat ISS - ISS to mouse?
cell migration - mouse IMP, rat ISS - ISS to human?
embryonic organ and hair follicle morphogenesis terms - Mouse IMP, rat ISS - ISS to human?
thyroid hormone generation - mouse IMP, rat ISS - ISS to human?
Back to GAFs_for_trees-based_annotations