Panther ID:11829: Difference between revisions

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[http://ppod.princeton.edu/cgi-bin/ppod.cgi/GO2OM/ORTHOMCL14416 PPOD/OrthoMCL link]
[http://ppod.princeton.edu/cgi-bin/ppod.cgi/GO2OM/ORTHOMCL14416 PPOD/OrthoMCL link]


==== Molecular Function: ====
==== Molecular Function: DONE ====
 
SourceForge notes:
DNA binding - human IDA, mouse ISS
 
Seq-spec and ds DNA binding - rat IDA - ISS to human and mouse?
 
TF activity - human IDA, Rat ISS - ISS to mouse?
 
Transcription repressor activity - Rat IDA, mouse ISS - ISS to Human?


Propagation:
Propagation:

Revision as of 15:05, 3 August 2009

FOXE1/Forkhead/Forkhead box family

Summary

SourceForge Link

PPOD/OrthoMCL link

Molecular Function: DONE

Propagation:

1) transcription factor activity (GO:0003700)

Up-propagation to common ancestor node AN24, down-propagation to the following Ref Genome proteins:

RAT_1562112

HUMAN_ENSG000000128573

RAT_1559697

because of positive experimental annotations to

HUMAN_ENSG00000049768

MOUSE_MGI:1891436

MOUSE_MGI:2148705

Cellular Component:

SourceForge notes:

Nucleus (human, rat) - ISS to mouse?

Mouse has no component annotation

Biological Process:

SourceForge notes: Both -ve and +ve regulation of transcription terms are present, but from looking at papers this seems OK.

-ve regulation of transcription - rat IDA, mouse ISS - ISS to human?

+ve regulation of transcription human IDA, rat ISS - ISS to mouse?

Thyroid gland development (human IMP, mouse IMP, rat ISS)

Hard palate development - human IMP, rat ISS - ISS to mouse?

Soft palate development - human IMP, rat ISS - ISS to mouse?

cell migration - mouse IMP, rat ISS - ISS to human?

embryonic organ and hair follicle morphogenesis terms - Mouse IMP, rat ISS - ISS to human?

thyroid hormone generation - mouse IMP, rat ISS - ISS to human?


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