Phage call August 21st-23rd 2012

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Revision as of 05:15, 14 August 2012 by Rfoulger (talk | contribs) (Created page with "==Topics for Aug 21-23rd discussion== * BM has been annotating phage lambda proteins (see [http://ecoliwiki.net/colipedia/index.php/Category:Gene_List:Phage_lambda Gene List of L...")
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Topics for Aug 21-23rd discussion

  1. GO:0043493 viral terminase complex isn't under GO:0044423 virion part or better yet, 0019028 viral capsid
  2. GO:0019030 icosahedral viral capsid - definition is a bit confusing b/c it says "the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices".
    • Is that true always (i.e. pseudo-T3)? But there isn't an icosahedral viral capsid, major subunit... I just ran into this when annotating the major head protein of lambda (gpE). I could annotate to both (GO:0019030 and GO:0098017), but that seems kind of redundant.
  3. need regulation of DNA integration terms -- GO:0015074 DNA integration
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