Procedure for selection of target genes (Retired): Difference between revisions
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* check the 'master list' to make sure the gene has not previously been selected | * check the 'master list' to make sure the gene has not previously been selected | ||
== | == Bleeding edge genes == | ||
* Recent highlighted articles in your database | * Recent highlighted articles in your database | ||
* [http://www.sciencedaily.com/news/health_medicine/genes/display=headlines Science Daily] | * [http://www.sciencedaily.com/news/health_medicine/genes/display=headlines Science Daily] |
Revision as of 14:09, 9 October 2007
Guidelines
- Try to select related genes (same pathway, same disease)
- Check that the gene is not already done (easiest to search by UniProt ID)
- Enter all ID in the Master Table
- For disease genes, enter the OMIM ID of the disease or a PMID of a paper describing the gene's implication in a disease
Disease genes
Conserved Human-E.coli
- list of genes is in the 'Suggestions' spreadsheet (look for the "conserved Hs-Ec" sheet)
- enter the ensemble ID in YOGY
- find the UniProt ID from the YOGY summary tables
- check the 'master list' to make sure the gene has not previously been selected
Bleeding edge genes
- Recent highlighted articles in your database
- Science Daily
- Medline
- Expasy Spotlight
- other suggestions welcome
Biochemical/signaling pathways
Try picking 5 genes form the same pathway