Projects stand up meeting 2021-03-17: Difference between revisions
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==GAF2.2 migration status== | ==GAF2.2 migration status== | ||
* [https://docs.google.com/document/d/1RVP5sStGtCU9KxMgm-T4JqMyVJVUX1-X-hRwX1SuNm0 "Stand-up meeting agendas] | * [https://docs.google.com/document/d/1RVP5sStGtCU9KxMgm-T4JqMyVJVUX1-X-hRwX1SuNm0 "Stand-up" meeting agendas] | ||
* Rules status: | * Rules status: | ||
** Convert GAF2.1 and older versions to GAF2.2: https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000059.md | ** Convert GAF2.1 and older versions to GAF2.2: https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000059.md | ||
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** convert to GAF2.2: Need to check how that would impact our data consumers | ** convert to GAF2.2: Need to check how that would impact our data consumers | ||
** integrate inferences into GAF2.2 file we produce (and stop producing separate inference files?) | ** integrate inferences into GAF2.2 file we produce (and stop producing separate inference files?) | ||
* Latest snapshot release is from Tuesday, March 16th - David, Kimberly need to QC | |||
** MGI need to round-trip to complete QC check? | |||
==Pathways2GO manuscript== | ==Pathways2GO manuscript== | ||
Revision as of 10:54, 17 March 2021
Attendees
- Present:
- Regrets:
- Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Judy, Paul, Chris
Projects presentation
Template:
- Next deliverables + expected date
- Progress
- Issues / blockers
March GO release
Depends on GAF2.2 migration
GAF2.2 migration status
- "Stand-up" meeting agendas
- Rules status:
- Convert GAF2.1 and older versions to GAF2.2: https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000059.md
- Check allowed relations for GAF2.2: https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000061.md
- Inferences are still in GAF2.1: Options:
- convert to GAF2.2: Need to check how that would impact our data consumers
- integrate inferences into GAF2.2 file we produce (and stop producing separate inference files?)
- Latest snapshot release is from Tuesday, March 16th - David, Kimberly need to QC
- MGI need to round-trip to complete QC check?
Pathways2GO manuscript
MGI, WB, ZFIN loads
ART1.0/Noctua3.0 plan
Any other ongoing project
Next sprint
https://docs.google.com/document/d/1AIuq8xxgV6bZZHFbXW-s3ln8PdUfZGNUuZcNFX1n7eQ/edit#