Projects stand up meeting 2021-03-17

From GO Wiki
Jump to navigation Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.

Attendees

  • Present: David, Kimberly, Pascale, Seth, Suzi, Paul, Chris + Peter, Dustin
  • Regrets:
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Judy, Paul, Chris

Projects presentation

Template:

  • Next deliverables + expected date
  • Progress
  • Issues / blockers

March GO release

Depends on GAF2.2 migration

GAF2.2 migration status

Pathways2GO manuscript

MGI, WB, ZFIN loads

  • MGI
    • loosing some annotations - Dustin to fix the script to make sure metadata (comments) is loaded
    • regulation of biological quality annotations not being loaded. Dustin will query and send a report. About 60 annotations missing

-> MGI is very close from being finished. -> MGI will have a 'drop and reload' mechanism -> Next 'project' is for GOC to turn MGI GPAD files from ttl back into GPAD create GPAD files for MGI to be able to import them

  • For eg issue with 'located_in' -> Noctua doesn't use the relations from our latest specs.


  • WB needs to do some more work with Alex and the P2GO file - will do together with SGD to be making most efficient use of Alex's time
    • SGD decided history is not quite as important as they thought it was initially
    • GPAD files still have a few bugs


  • ZFIN essentially done, the plug has been pulled

ART1.0/Noctua3.0 plan

Any other ongoing project

Next sprint

https://docs.google.com/document/d/1AIuq8xxgV6bZZHFbXW-s3ln8PdUfZGNUuZcNFX1n7eQ/edit#