Projects stand up meeting 2021-03-24

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Attendees

  • Present: David, Kimberly, Pascale, Seth, Suzi, Paul, Chris + Peter, Dustin
  • Regrets:
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Judy, Paul, Chris

Projects presentation

Template:

  • Next deliverables + expected date
  • Progress
  • Issues / blockers

March GO release/GAF2.2 migration

Status

  • David and Kimberly checking latest pipeline run with Noctua GPADs run through go rules
    • Some changes were needed after the initial run to update file names so consuming groups' pipelines didn't need to be changed
  • David will check MGI round trip on Monday; if all goes well and there are no other issues, we'll aim for production release next week

Pathways2GO manuscript

  • Resubmitted to Bioinformatics

MGI, WB, ZFIN import

Missing file from SVN

2 helpdesk emails (including Paul Pavlidis) request: http://release.geneontology.org/latest-termdb/go_daily-termdb.rdf-xml.gz see https://github.com/geneontology/helpdesk/issues/302 What was this file? Should we try to restore it?

ART1.0/Noctua3.0 plan

Any other ongoing project

Next sprint

https://docs.google.com/document/d/1AIuq8xxgV6bZZHFbXW-s3ln8PdUfZGNUuZcNFX1n7eQ/edit#