Projects stand up meeting 2021-04-07

Attendees

• Present: Chris, David, Huaiyu, Judy, Paul, Seth, Suzi
• Regrets:
• Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Judy, Paul, Chris

Announcement

No GO calls next week - but we'll have a call regardless to prepare for the GO meeting. GOC meeting is in 3 weeks

GOC meeting

• In about 1 month; let's use more of these calls to work on the meeting agenda
• Agenda is here: https://docs.google.com/document/d/1QVruWj797NOHJgs06859Hy3WvsL504H5XcTEwSiGqUQ/edit#heading=h.taqifus25wlx
• Survey from last time: https://docs.google.com/spreadsheets/d/11OJS0a_DT63ptMxY0qqQnOb8wafNCb4uBwDFg2xJJxc/edit#gid=440753822

Projects presentation

Template:

• Next deliverables + expected date
• Progress
• Issues / blockers

COVID19 Disease Map Presentation

• COVID19 Disease Map consortium > presentation on Friday meeting on April 16th
• Kimberly? Or can anyone else give an update

MGI, WB, ZFIN, SGD import

• Status of import files
• Status of emitted GPAD files
  • gpad diff tool: first specs are here: https://github.com/geneontology/go-annotation/issues/3687
    • Is this sufficient for now?

PAINT Annotation Files and Identifiers

• Identifiers in PAINT GAFs are causing some issues
  • https://github.com/geneontology/paint/issues/56
  • https://github.com/geneontology/go-annotation/issues/3702

Any other ongoing project

Subsets creation documentation

https://docs.google.com/document/d/1mh-xrwAWGqOeviNsJxQ1m619uL4lgrRggYO6msntQpk/edit?ts=605a3373

Nearly finished projects

• Release of ART and Noctua form to Noctua (currently on dev only):

Update April 2nd: now on noctua-dev for testing; David and Kimberly will need to test and I'll need to write up documentation on how to use it

• Model copy: remaining issues
  • User Stories
• Annotating protein chains (UniProt): how to get the GPI we need

Next sprint

• Model copy ?

https://docs.google.com/document/d/1AIuq8xxgV6bZZHFbXW-s3ln8PdUfZGNUuZcNFX1n7eQ/edit#