Projects stand up meeting 2021-06-16

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Revision as of 02:30, 10 June 2021 by Pascale (talk | contribs) (Created page with "==Attendees== * Present: * Regrets: * Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Judy, Paul, Chris =Announcements= =Discussion points= ==User stories / use...")
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Attendees

  • Present:
  • Regrets:
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Judy, Paul, Chris

Announcements

Discussion points

User stories / use cases

A user requests annotations for Chlorocebus sabaeus (Vervet - green monkey) in a .gaf (gzip) format (Helpdesk ticket: https://github.com/geneontology/helpdesk/issues/319). This is certainly something GO users expect we can deliver.

  • Issues:
    • We dont have IEAs, and anyway our plan was to fully load annotations from 142 species, and none from other species. Do we have any guidelines for this specific use case? Do we direct users to GOA? Can we set up a special API call to QuickGO?
    • Alternatively, could we generate files (even if only once a year) for many species, without them being in the 'main pipeline', but so that people could get data for their analyses ?
    • This might include Tree Grafter data, as this seems non-trivial to ask users to run this themselves



Priorities

https://docs.google.com/spreadsheets/d/19-i43w0mGQdFYmKXqskVIgrDO-pVTWo1YgjaWa5PI1o/edit#gid=68094648

GOC meeting Action Points

action items

  • Are any of these items high priority?