Projects stand up meeting 2021-07-07

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Attendees

  • Present:
  • Regrets:
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris

Announcements

GOC meeting dates: Oct 13-15 (Wed to Friday)

Discussion points

Ongoing projects

Urgent bug

NEO - not loading all MGI entities: https://github.com/geneontology/neo/issues/70 Jim needed to help fix this

This seems to be fixed.

GAF2.2 Migration

SynGO Annotations

  • There are some data issues with these annotations
    • Use of an obsolete ECO code
    • Use of IMP for CC in possibly a different way than standard annotations - RGD has asked about this
    • It would be good to at least update the obsolete ECO code in the GO-CAMs
    • Try contacting SynGO about this before updating the .ttl files in the noctua-models repo?
    • Other places SynGO data resides, e.g. Protein2GO?

MOD imports

Kimberly and David described tasks - not all tickets are assigned yet; need Jim and probably Sierra


Ontology


Priorities

  • GPAD project
  • NEO

https://docs.google.com/spreadsheets/d/19-i43w0mGQdFYmKXqskVIgrDO-pVTWo1YgjaWa5PI1o/edit#gid=68094648

GOC meeting Action Points

action items

  • Are any of these items high priority?