Projects stand up meeting 2021-12-08

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Attendees

  • Present:
  • Regrets:
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris

Announcements

2021 progress reports

  • Year-end report not needed as this is the last year of the current grant cycle.
  • We will, however, need to create an end-of-grant report due in May 2022.

Priorities & objectives for next grant cycle

2h meeting, either Jan 19, 26 or Feb 2 - please fill Doodle: https://doodle.com/poll/hqc9dy3xit3anydp

  • Create a Google doc for agenda items?

Discussion points

Multi-species GAFs

  • Some groups may submit annotations for multiple species even though they may not be considered the 'canonical' source for that species
  • TAIR/Phoenix would like to submit annotations for Chlamydomonas reinhardtii and Zea mays in a GAF that they produce
  • Is GO okay with this kind of data flow?
  • An alternative would be to have GOA pick up the annotations and have them flow to GO via the UniProt all file

minerva tracker jamboree

  • Tuesday, December 14th, ~2-5pm EDT
  • Goal: to close any minerva tickets we can and then assess what's left and how to approach the work

Offboarding document

https://docs.google.com/document/d/1UOu3fjD8isodl6HuhOcV5yrUeWAGI71Uam-x2ew9MvM/edit

Suzi will give feedback


  • Almost ready to be put on the wiki

Some project allocation/reprioritization?

Running into some issues with server migration that is affecting GO-CAM services.

Current issues: https://github.com/geneontology/api-gorest/issues/3 https://github.com/geneontology/api-gorest/issues/4

Other proposals: https://github.com/geneontology/noctua/issues/744

  • Need Dustin, Tremayne and Jim over the next week approx

Any blocking issues on ongoing projects?

  • Taxon ID without label #388
    • Patrick has made some production SARS-CoV-2 models but they are not browsable or searchable by 'organism'
    • Update taxslim for go-lego? Other approaches? Who can do this?

PIs on projects

https://github.com/orgs/geneontology/projects


GOC meeting follow up