RefGenome10Jun08 Phone Conference (Archived): Difference between revisions
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===Review old action items=== | ===Review old action items=== | ||
# All: Annotation Quality control: Please pick an ortholog set from the Curation Targets table | # All: Annotation Quality control: Please pick an ortholog set from the Curation Targets table [http://spreadsheets.google.com/ccc?key=pwOksMOra5uq4vIYjPgefPw] | ||
http://spreadsheets.google.com/ccc?key=pwOksMOra5uq4vIYjPgefPw | |||
# All: Annotation Quality control: Have a look at the SF items and see if the ortholog from your organism is correctly annotated ("comprehensive"). Let lead curator for that set know that you're done. | # All: Annotation Quality control: Have a look at the SF items and see if the ortholog from your organism is correctly annotated ("comprehensive"). Let lead curator for that set know that you're done. | ||
# Seth: send URL sometime to the prototype of the ortholog tool this week | # Seth: send URL sometime to the prototype of the ortholog tool this week | ||
===Action items from the meeting=== | |||
#Paul will grab gp2protein files on May 1st and begin his run | |||
# Develop annotation SOPs - this needs to be assigned | |||
===New action items=== | ===New action items=== | ||
Revision as of 10:27, 10 June 2008
Tuesday June 10, 10 AM CDT (8 AM PDT, 4 PM BST)
Present
ACTION ITEMS
Review old action items
- All: Annotation Quality control: Please pick an ortholog set from the Curation Targets table [1]
- All: Annotation Quality control: Have a look at the SF items and see if the ortholog from your organism is correctly annotated ("comprehensive"). Let lead curator for that set know that you're done.
- Seth: send URL sometime to the prototype of the ortholog tool this week
Action items from the meeting
- Paul will grab gp2protein files on May 1st and begin his run
- Develop annotation SOPs - this needs to be assigned
New action items
[Action item] : All : fill the old Google spreadsheets so that Mary can generate the ortho sets for making the graphs.
Meetings
- Please sign up for the electronic refgenome curation jamboree http://doodle.ch/np9byb6avdi8zwc4
- Next GOC meeting will be in Montreal, Tues-Wed Oct 21-22. Should we add a day for Ref Genome annotation discussion? That would likely be Monday Oct 20.
Software
Graphs
Mary: I have updated the PPOD12 graphs (spreadsheet links should work as before): http://proto.informatics.jax.org/prototypes/GOgraphEX/PPOD12_Graphs/
I have also made graphs for the new targets (not much there yet): http://proto.informatics.jax.org/prototypes/GOgraphEX/PPOD_Graphs_June/ I can continue to update both sets as folks add annotations until software takes over.
Comments about new targets
http://spreadsheets.google.com/ccc?key=pZhlLFuj8ewDe799QTmxzCA&hl=en
Annotation QC
http://sourceforge.net/tracker/?group_id=36855&atid=1040173
- GRIN1 Donghui
- EIF2B2 Stacia
- ACRV1B Ranjana
Next conference call
Tuesday June 8, 2008, 1 PM CDT, 11 AM PDT, 7 PM BST
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