Difference between revisions of "Reference Genome Annotation Meeting"

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(New page: == General Info== ==Agenda== ===Strategies to identify orthologs=== * Procedures different databases are using can be found on the Orthology discussion page * Standardize procedure ...)
 
(Review of progress toward database and tool development)
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===Review of progress toward database and tool development===
 
===Review of progress toward database and tool development===
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* Chris, Sohel and Mary are developing a web-based tool that will replace the currant Google spreadshhet
 +
http://dcn.spreadsheets.google.com/ccc?id=o16926456948884040128.4584390909151853752.07000735126025259412.442372083524637957
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* Demonstration of the tool, curator input for further development
  
 
===Discussions regarding metrics, including making a plan for how to use metrics===
 
===Discussions regarding metrics, including making a plan for how to use metrics===
  
 
===Annotation consistency exercise===
 
===Annotation consistency exercise===

Revision as of 10:11, 7 June 2007

General Info

Agenda

Strategies to identify orthologs

  • Procedures different databases are using can be found on the Orthology discussion page
  • Standardize procedure for identification across MODs
  • Which model organisms are available in which databases, e.g. Dicty is not in Treefam

How to prioritize disease genes

How to assess the progress made towards curation of reference genome genes; strategies for improvement

Review of progress toward database and tool development

  • Chris, Sohel and Mary are developing a web-based tool that will replace the currant Google spreadshhet

http://dcn.spreadsheets.google.com/ccc?id=o16926456948884040128.4584390909151853752.07000735126025259412.442372083524637957

  • Demonstration of the tool, curator input for further development

Discussions regarding metrics, including making a plan for how to use metrics

Annotation consistency exercise