Difference between revisions of "Reference Genome February 2010 (Archived)"

From GO Wiki
Jump to: navigation, search
m
m (PAINT updates)
Line 2: Line 2:
 
===PAINT beta 19===
 
===PAINT beta 19===
 
Here are some key changes to this release:
 
Here are some key changes to this release:
# Drastically sped up deleting an association from an ancestral node
+
# Drastically sped up deleting an association from an ancestral node (we're talking orders of magnitude here, folks).
(we're talking orders of magnitude here, folks).
+
# Sped up (somewhat) the creation of new associations.  Keep in mind that the GO database is hit during this step, so your connection speed to the database will affect the speed of this step.  Still, should be somewhat faster than before.
# Sped up (somewhat) the creation of new associations.  Keep in mind
+
# Added support for partial matches to "Find".  Also changed the look of the dialog a bit (it looked kinda ugly IMO) and added support for pressing <Enter> to start the search, rather than having to click on the "Ok" button.
that the GO database is hit during this step, so your connection
 
speed to the database will affect the speed of this step.  Still,
 
should be somewhat faster than before.
 
# Added support for partial matches to "Find".  Also changed the look
 
of the dialog a bit (it looked kinda ugly IMO) and added support for
 
pressing <Enter> to start the search, rather than having to click
 
on the "Ok" button.
 
 
#All panels should now retain the menu when undocked.
 
#All panels should now retain the menu when undocked.
  
Line 18: Line 11:
 
# Improved annotating rules.
 
# Improved annotating rules.
 
# Undocking the Annotation Matrix will keep the menu.
 
# Undocking the Annotation Matrix will keep the menu.
# Synchronized horizontal scrolling in the Annotation Matrix.  Scrolling
+
# Synchronized horizontal scrolling in the Annotation Matrix.  Scrolling sideways will cause both the matrix and headers (terms) to scroll together.
sideways will cause both the matrix and headers (terms) to scroll
 
together.  
 
 
 
  
 
==PAINT demo==
 
==PAINT demo==

Revision as of 10:02, 9 February 2010

PAINT updates

PAINT beta 19

Here are some key changes to this release:

  1. Drastically sped up deleting an association from an ancestral node (we're talking orders of magnitude here, folks).
  2. Sped up (somewhat) the creation of new associations. Keep in mind that the GO database is hit during this step, so your connection speed to the database will affect the speed of this step. Still, should be somewhat faster than before.
  3. Added support for partial matches to "Find". Also changed the look of the dialog a bit (it looked kinda ugly IMO) and added support for pressing <Enter> to start the search, rather than having to click on the "Ok" button.
  4. All panels should now retain the menu when undocked.

PAINT beta 18

It has the following changes:

  1. Improved annotating rules.
  2. Undocking the Annotation Matrix will keep the menu.
  3. Synchronized horizontal scrolling in the Annotation Matrix. Scrolling sideways will cause both the matrix and headers (terms) to scroll together.

PAINT demo

Ed Lee gave a demo of the PAINT tool to the reference genome group.

Monthly conference call

We discussed the format of the GO annotation camp, the prioritization of the lung branching morphogenesis targets, and PAINT. Minutes are available here: 9_FEB_2010_RefGen_Phone_Conference



Back to Reference_Genome_Annotation_Project page