Release Pipeline
Release Cycle
The release cycle is monthly.
Additionally snapshot releases are created daily. These are intended only for internal consumption by GOC members. End-users get the monthly releases
Per-group curator QC reports
Every day a dry-run of the full pipeline runs. We call this snapshot. As part of this run, we generate products and reports that are of use to db admins and curators of the various contributing groups (MODs, UniProt, etc) to the GO Consortium.
- http://snapshot.geneontology.org/reports/
- summary.txt. EXAMPLE: dictybase.report.md
- prediction-report.txt EXAMPLE: mgi-prediction-report.txt
- owltools-check.txt EXAMPLE: mgi-owltools-check.txt
- http://snapshot.geneontology.org/products/annotations/
- GROUP-prediction.gaf EXAMPLE: pombase-prediction.gaf
Summary
This is a basic summary of the parsing of your GAF file. It functionally replaces the old "Mike's script"
These are found in reports
Example: http://snapshot.geneontology.org/reports/dictybase.report.md
These report basic syntax errors and implement a subset of checks in the GO QC Rules
Prediction Report and OWLTools Checks
Predictions
Technical Details
See the README.md in the pipeline GitHub repo: https://github.com/geneontology/pipeline