Restoring an Obsolete Ontology Term: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
mNo edit summary
mNo edit summary
Line 9: Line 9:
#* Modify the term label to remove 'obsolete'   
#* Modify the term label to remove 'obsolete'   
#* Modify the term definition to remove 'OBSOLETE.'  
#* Modify the term definition to remove 'OBSOLETE.'  
#* Update the comment to Note that this term was reinstated from obsolete.
#* Update the comment to <code>Note that this term was reinstated from obsolete. </code>
 
#* Remove any replaced_by and consider tags by clicking on the (x) at the right-hand side
#* Remove any replaced_by and consider tags by clicking on the (x) at the right-hand side
#* Add Subclasses as appropriate
#* Add Subclasses as appropriate

Revision as of 10:24, 5 April 2019

See Ontology_Editors_Daily_Workflow for creating branches and basic Protégé instructions.

Notification

Send an email notification to go-friends@mailman.stanford.edu and create a ticket with the same notification in the GitHub Announcements Tracker.

Protégé Process for Restoring an Obsolete Ontology Term

  1. Navigate to the obsolete term
  2.  In the annotation window:
    • Modify the term label to remove 'obsolete'
    • Modify the term definition to remove 'OBSOLETE.'
    • Update the comment to Note that this term was reinstated from obsolete.
    • Remove any replaced_by and consider tags by clicking on the (x) at the right-hand side
    • Add Subclasses as appropriate
    • Remove the owl:deprecated: true tag
  1. Run the reasoner
  2.  Save.

See Ontology_Editors_Daily_Workflow for commit, push and merge instructions.

Review Status

Last reviewed: April 5, 2019