Review of trees-based annotations (Retired): Difference between revisions
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* MSH family ([[Panther ID:11361]]): [[Media:MSH_annotations_final.xls]] | * MSH family ([[Panther ID:11361]]): [[Media:MSH_annotations_final.xls]] | ||
This is a GAF file containing suggested annotations for the MSH6 family of proteins (PTHR11361) produced by protein family annotators using the PANTHER method, June 2009. It is an Excel worksheet with Autofilter turned on and the splitscreen frozen to show a header row. | |||
There are 2 types of annotations: | |||
**Up-propagation (in boldface): Annotations to hypothetical ancestral proteins showing a consensus parental GOID (column E) and the proteins on which these annotations are based (column H). | |||
**Down-propagation (following the corresponding up-propagation): Annotations to real proteins based on their descent from the hypothetical ancestors (column H). | |||
This file contains suggested annotations for '''all RefGenome organisms except E. coli.''' | |||
Revision as of 16:04, 15 June 2009
- MSH family (Panther ID:11361): Media:MSH_annotations_final.xls
This is a GAF file containing suggested annotations for the MSH6 family of proteins (PTHR11361) produced by protein family annotators using the PANTHER method, June 2009. It is an Excel worksheet with Autofilter turned on and the splitscreen frozen to show a header row. There are 2 types of annotations:
- Up-propagation (in boldface): Annotations to hypothetical ancestral proteins showing a consensus parental GOID (column E) and the proteins on which these annotations are based (column H).
- Down-propagation (following the corresponding up-propagation): Annotations to real proteins based on their descent from the hypothetical ancestors (column H).
This file contains suggested annotations for all RefGenome organisms except E. coli.