SQSTM1: Difference between revisions
(New page: Return to Listing of Immune Related Genes Beginning with 'S' == '''Information and Links''' == <big>'''SQSTM1''' ''sequestosome 1''</big> '''Also known as: '''Sq...) |
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[[Immune Gene Page S|Return to Listing of Immune Related Genes Beginning with 'S']] | [[Immune Gene Page S|Return to Listing of Immune Related Genes Beginning with 'S']] | ||
[[Genes Involved in Muscle Biology|Return to Listing of Genes Involved in Muscle Biology]] | |||
== '''Information and Links''' == | == '''Information and Links''' == | ||
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'''Also known as: '''Sqstm1, A170, OSF-6, OSIL, Osi, PDB3, STAP, ZIP3, p60, p62, p62B | '''Also known as: '''Sqstm1, A170, OSF-6, OSIL, Osi, PDB3, STAP, ZIP3, p60, p62, p62B | ||
<div align="right"><small>Nomenclature accurate as of | <div align="right"><small>Nomenclature accurate as of November 13, 2007</small></div> | ||
'''Gene Details: '''[http://www.genenames.org/data/hgnc_data.php?hgnc_id=11280 HGNC] (human) [http://www.informatics.jax.org/searches/accession_report.cgi?id=MGI:107931 MGI] (mouse) [http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=69287 RGD] (rat) | '''Gene Details: '''[http://www.genenames.org/data/hgnc_data.php?hgnc_id=11280 HGNC] (human) [http://www.informatics.jax.org/searches/accession_report.cgi?id=MGI:107931 MGI] (mouse) [http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=69287 RGD] (rat) | ||
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'''Gene Ontology Consortium Amigo Browser:''' [http://www.godatabase.org/cgi-bin/amigo/go.cgi?action=query&view=query&query=SQSTM1&search_constraint=gp Many Species] | '''Gene Ontology Consortium Amigo Browser:''' [http://www.godatabase.org/cgi-bin/amigo/go.cgi?action=query&view=query&query=SQSTM1&search_constraint=gp Many Species] | ||
'''GOA QuickGO Browser: '''[http://www.ebi.ac.uk/ego/GSearch?query=Q13501&mode=name_syno&ontology=all_ont Human] [http://www.ebi.ac.uk/ego/GSearch?query=Q64337&mode=name_syno&ontology=all_ont Mouse] [http://www.ebi.ac.uk/ego/GSearch?query= | '''GOA QuickGO Browser: '''[http://www.ebi.ac.uk/ego/GSearch?query=Q13501&mode=name_syno&ontology=all_ont Human] [http://www.ebi.ac.uk/ego/GSearch?query=Q64337&mode=name_syno&ontology=all_ont Mouse] [http://www.ebi.ac.uk/ego/GSearch?query=O08623&mode=name_syno&ontology=all_ont Rat] | ||
'''MGI Browser: '''[http://www.informatics.jax.org/javawi2/servlet/WIFetch?page=markerGO&id=MGI:107931 Mouse] [http://www.informatics.jax.org/javawi2/servlet/WIFetch?page=GOOrthologyGraph&id=MGI:107931 Mouse-Human-Rat Comparative GO Graph] | '''MGI Browser: '''[http://www.informatics.jax.org/javawi2/servlet/WIFetch?page=markerGO&id=MGI:107931 Mouse] [http://www.informatics.jax.org/javawi2/servlet/WIFetch?page=GOOrthologyGraph&id=MGI:107931 Mouse-Human-Rat Comparative GO Graph] | ||
Revision as of 08:13, 14 November 2007
Return to Listing of Immune Related Genes Beginning with 'S'
Return to Listing of Genes Involved in Muscle Biology
Information and Links
SQSTM1 sequestosome 1
Also known as: Sqstm1, A170, OSF-6, OSIL, Osi, PDB3, STAP, ZIP3, p60, p62, p62B
Gene Details: HGNC (human) MGI (mouse) RGD (rat)
Entrez Gene Pages: Human Mouse Rat
Orthology Predictions
Through MGI (human and other mammalian species)
Through HGNC/HCOP (vertebrate and invertebrate orthologs)
Existing GO Annotation
Use the links below as well as the links to the gene information pages above to check existing GO annotation for SQSTM1.
GO annotation for a particular gene in a set of orthologous genes will vary between species depending upon the experimental evidence available, annotation completeness, and fundamental differences in biology. Please take note of any aspects of the gene's biology that are not represented in the existing GO annotations.
Gene Ontology Consortium Amigo Browser: Many Species
GOA QuickGO Browser: Human Mouse Rat
MGI Browser: Mouse Mouse-Human-Rat Comparative GO Graph
RGD Browser: Rat
Community Input Section
Examine the GO annotations for SQSTM1, using the links above, and tell us about aspects of its biology that are still unannotated by editing the wiki page directly. GO curators are notified when particular gene pages are changed and will act upon your contributed information to create new GO annotations.
Supporting literature may be found through the GeneRIFs on the Entrez Gene pages above, or directly through PubMed or CiteXplore
Please duplicate and complete the following sections:
________________________________________________________
Gene function, process, cellular location or interacting partner (as a list or short summary):
Method or evidence used to support the annotation (eg enzyme assay, flow cytometry, immunoprecipitation, mutant phenotype, etc.):
Supporting Literature Reference (PubMedID or citation):
Contact email address (optional):
Additional notes:
________________________________________________________
Thank you
Link to example of submitted GO annotation