SWUG:Meeting 2007-06-27: Difference between revisions
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[[Category:SWUG_Meetings]] | |||
== Meeting notes == | == Meeting notes == | ||
Present: | Present: Suzi, Chris, Ben, Stan, Amelia (silent, no mic), Seth | ||
Absent: Mary (joining late?), Sohel, Dan | |||
== Review of previous action items == | == Review of previous action items == | ||
* Documentation : Chris, Seth and Amelia to redirect links | |||
TODO | |||
* ID Tracking : Chris, Mary to send RQs to Stan | |||
TODO | |||
* Protein family annotation tool : Suzi to send | |||
TODO | |||
== Reports and Discussion == | == Reports and Discussion == | ||
Line 17: | Line 32: | ||
* map2slim | * map2slim | ||
* term enrichment | * term enrichment | ||
* sql web client for mirrors | |||
=== Reference Genomes === | === Reference Genomes === | ||
Line 26: | Line 42: | ||
=== Software Architecture, Schema and Modeling === | === Software Architecture, Schema and Modeling === | ||
Proposed new schema changes, see: | |||
http://gocwiki.geneontology.org/index.php/SWUG:Database | |||
* ncbi taxon hierarchy | * ncbi taxon hierarchy | ||
Line 32: | Line 51: | ||
=== Production === | === Production === | ||
* term load/1.2/graph_path issues | |||
ACTION: Ben to add tests | |||
* bulk upload | * bulk upload | ||
Line 39: | Line 62: | ||
* amigo paper | * amigo paper | ||
* NAR preparation | * NAR preparation | ||
subm: sept | |||
== AOB == | == AOB == | ||
== Review of Action Items == | == Review of Action Items == | ||
* Documentation : Chris, Seth and Amelia to redirect links | |||
* ID Tracking : Chris, Mary to send RQs to Stan | |||
* Protein family annotation tool : Suzi to send | |||
* Ben to add tests for graph loading issues |
Latest revision as of 18:01, 14 July 2014
Meeting notes
Present: Suzi, Chris, Ben, Stan, Amelia (silent, no mic), Seth
Absent: Mary (joining late?), Sohel, Dan
Review of previous action items
- Documentation : Chris, Seth and Amelia to redirect links
TODO
- ID Tracking : Chris, Mary to send RQs to Stan
TODO
- Protein family annotation tool : Suzi to send
TODO
Reports and Discussion
OBO-Edit
- docking frameworks
- memory leak issues?
- cross-product issues
AmiGO
- map2slim
- term enrichment
- sql web client for mirrors
Reference Genomes
- update from tcon (Mary)
- prototype progress (Sohel)
- schema changes for homology
- AmiGO integration of graphs
Software Architecture, Schema and Modeling
Proposed new schema changes, see: http://gocwiki.geneontology.org/index.php/SWUG:Database
- ncbi taxon hierarchy
- multi-species
- cross-products
Production
- term load/1.2/graph_path issues
ACTION: Ben to add tests
- bulk upload
- taxons
Documentation & Outreach, Papers, Presentations
- amigo paper
- NAR preparation
subm: sept
AOB
Review of Action Items
- Documentation : Chris, Seth and Amelia to redirect links
- ID Tracking : Chris, Mary to send RQs to Stan
- Protein family annotation tool : Suzi to send
- Ben to add tests for graph loading issues