SWUG:Meeting 2012 04 11: Difference between revisions
Jump to navigation
Jump to search
(→Solr) |
(→Solr) |
||
| Line 13: | Line 13: | ||
* EBI test schema overview (Tony/Carlos) | * EBI test schema overview (Tony/Carlos) | ||
* GOlr schema overview (Seth) | * GOlr schema overview (Seth) | ||
The current work is on this schema: [http://geneontology.svn.sourceforge.net/viewvc/geneontology/java/gold/solr/conf/schema.xml?revision=4422&content-type=text%2Fplain] | |||
Which is being pieced together with these: [https://code.google.com/p/owltools/source/browse/#svn%2Ftrunk%2FOWLTools-Solr%2Fsrc%2Fmain%2Fresources] with owltools. The command to generate the Solr schema looks like: | |||
owltools --solr-config /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ont-config.yaml /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/bio-config.yaml /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ann-config.yaml /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ann_ev_agg-config.yaml --solr-schema-dump | |||
* Design questions: | * Design questions: | ||
** How much to cache? Graph info? | ** How much to cache? Graph info? | ||
** How generic? E.g. use in PO | ** How generic? E.g. use in PO | ||
* OWLTools loading overview (Seth) | * OWLTools loading overview (Seth) | ||
Looks something like: | |||
owltools /srv/tmp/go.owl /srv/tmp/cl.owl /srv/tmp/taxslim.owl --solr-url http://localhost:8080/solr/ --solr-purge --solr-config /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ont-config.yaml --solr-load-ontology --solr-load-gafs /srv/tmp/gene_association.mgi | |||
* Example queries (Mary) | * Example queries (Mary) | ||
* Ontology property views - closure facets (Chris) | * Ontology property views - closure facets (Chris) | ||
Revision as of 23:50, 9 April 2012
Action items from previous calls
- ACTION: chris, tony and jane to have a call to discuss organization
- ACTION: Mary to add links to example queries and schema (Mary)
- ACTION: set up a call with: Carlos, Tony, Seth, Mary (monday?) (Seth)
- ACTION: docs on how we deal with closures in solr (Seth)
Solr
- Overview (Seth)
- EBI test schema overview (Tony/Carlos)
- GOlr schema overview (Seth)
The current work is on this schema: [1]
Which is being pieced together with these: [2] with owltools. The command to generate the Solr schema looks like:
owltools --solr-config /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ont-config.yaml /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/bio-config.yaml /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ann-config.yaml /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ann_ev_agg-config.yaml --solr-schema-dump
- Design questions:
- How much to cache? Graph info?
- How generic? E.g. use in PO
- OWLTools loading overview (Seth)
Looks something like:
owltools /srv/tmp/go.owl /srv/tmp/cl.owl /srv/tmp/taxslim.owl --solr-url http://localhost:8080/solr/ --solr-purge --solr-config /home/sjcarbon/local/src/svn/owltools/OWLTools-Solr/src/main/resources/ont-config.yaml --solr-load-ontology --solr-load-gafs /srv/tmp/gene_association.mgi
- Example queries (Mary)
- Ontology property views - closure facets (Chris)
- Client applications. Generic javascript libraries?
- Next steps
- BOSC submission?
- Hackathon?
- Converge on single schema