Signalling Workshop Agenda: Difference between revisions
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== Minutes == | == Minutes == | ||
*[https://docs.google.com/document/d/1wCzCkPL9ft20ZP5XnTn8IQAcxoFEduaBmzVWKN0hbU0/edit?usp=sharing Signaling Workshop Minutes] | *[https://docs.google.com/document/d/1wCzCkPL9ft20ZP5XnTn8IQAcxoFEduaBmzVWKN0hbU0/edit?usp=sharing Signaling Workshop Minutes] | ||
== Proposed topics for discussion (suggested prior to meeting; please see table above for actual topics and schedule) == | == Proposed topics for discussion (suggested prior to meeting; please see table above for actual topics and schedule) == | ||
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==Other databases with signalling | == Other databases with signalling pathway s== | ||
* [http://reactome.org/ Reactome] | * [http://reactome.org/ Reactome] | ||
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==Additional Notes== | ==Additional Notes== | ||
[http://wiki.geneontology.org/index.php/2017_Cambridge_GOC_Signalling_Workshop Back to Signalling Workshop Logistics Page] | |||
Revision as of 11:10, 21 September 2017
Signaling Workshop Agenda
Chairs
- Ruth (UCL) will chair the morning session; Kimberly (WB) will chair the afternoon session
Meeting Schedule
Time | Item | Minutes |
---|---|---|
9:00am - 9:15am | Opening Remarks - Ruth (UCl) | Val (PomBase) |
9:20am - 9:45am | Summary of Approach to Analysis and Project Organization - David H. (MGI) and Kimberly (WB) | Val (PomBase) |
9:50am - 10:50am | Canonical Wnt Signaling - Helen (FB) and Kimberly (WB) | Val (PomBase) |
11:00am - 11:30am | BREAK | na |
11:30am - 12:30pm | MAPK Signaling - David H. (MGI) and Sabrina (ZFIN) | |
12:30pm - 1:30pm | LUNCH | na |
1:30pm - 2:30pm | GPCR Signaling - Pascale (SIB) and Petra (dictyBase) | |
2:30pm - 3:00pm | JAK/STAT Signaling - Giulia (FB) and Ruth (UCL) | |
3:00pm - 3:30pm | Ca2+ Signaling involved in Mammalian Fertilization - Penelope (UniProt) | |
3:30pm - 4:00pm | BREAK | na |
4:00pm - 5:00pm | Discussion |
Minutes
Proposed topics for discussion (suggested prior to meeting; please see table above for actual topics and schedule)
Proposer (and group) | Signaling pathway | Reference | What this pathway offers | link to uploaded figures and noctua model |
---|---|---|---|---|
Judy (MGI) | General information | [http://www.cellsignallingbiology.org/csb/002/002.pdf cell signaling pathways | useful overview of lots of different types of pathways | |
Val (PomBase) | TOR signalling | |||
Ruth (UCL) | Gastrin signaling | PMID:26205660 | Multiple intracellular signaling pathways converge to regulate transcription (see Fig 2) Fig2B nicely groups different 'parts' of the pathway. Also brings to discussion annotation of entities responsible for release of the ligand. | impossible to get this modelled in GO-CAM before October |
Ruth (UCL) | Apoptosis | Apoptosis working group | this has already been worked on in GO and guidelines established, need to consider aligning to these | Apoptosis curation manual |