Software and Utilities: Difference between revisions

Latest revision as of 09:47, 9 April 2019

For the legacy page, see Software_and_Utilities_(Archived) and Software and Utilities group summary

Meetings

See the GO calendar

Core meetings:

biweekly all-day thursday LBL hack days (anyone can zoom in)
biweekly Noctua calls
adhoc zooms between developers as needed

Also:

updates on go-managers calls
ontology engineering team join ontology calls
most devs join annotation calls

Mail List

godev-internal on groups.io

Resources

Documentation

Trackers

People

The following people dedicate some portion of their time to the GO project

Seth Carbon LBL (Manager, Noctua, AmiGO, Solr, Infrastructure)
Eric Douglass LBL (Triplestore, Ontology Engineering and Semantic Tools, Pipeline)
Nathan Dunn LBL (Tools, AGR integration)
Ben Good LBL (Noctua, Pathway integration)
Marcin Joachimiak LBL, (Bioinformatics)
HyeongSik Kim LBL (OWL, Solr)
Chris Mungall LBL (PI)
Deepak Unni LBL (BioLink API)

Laurent-Phillippe Albou USC (LBL affiliate) (Bioinformatics, Networks)
Dustin Ebert USC (Pipeline, GO-CAMs)
Huaiyu Mi USC (Panther, PAINT Pipeline)
Tremayne Mushayahama USC (Noctua)
Anushya Muruganujan USC (Panther, PAINT, Enrichment)

Jim Balhoff RENCI (Noctua, Ontology Engineering)

Wiki

All software-and-utilities pages on the wiki should go in the wikispace SWUG (SoftWare Utilities Group)

Projects

All projects are managed via GitHub projects. For a list of all, see the GO github projects page

GitHub Repos

AmiGO

Noctua

@@ Line 1: / Line 1: @@
-=OBO-Edit=
+[[Category:Software]]
-=AmiGO and go-perl=
+For the legacy page, see [[Software_and_Utilities_(Archived)]] and [[Software and Utilities group summary]]
-Main page
-- http://www.godatabase.org
-- go-dev
+==Meetings==
-http://www.godatabase.org/dev/
-=SO=
+See the GO calendar
-Main page
+Core meetings:
-- http://song.sourceforge.net
-==MiSO==
+* biweekly all-day thursday LBL hack days (anyone can zoom in)
+* biweekly Noctua calls
+* adhoc zooms between developers as needed
-=Obol=
+Also:
-http://www.fruitfly.org/~cjm/obol
+* updates on go-managers calls
+* ontology engineering team join ontology calls
+* most devs join annotation calls
+==Mail List==
+* godev-internal on groups.io
+==Resources==
+===Documentation===
+===Trackers===
+===People===
+The following people dedicate some portion of their time to the GO project
+* Seth Carbon LBL (Manager, Noctua, AmiGO, Solr, Infrastructure)
+* Eric Douglass LBL (Triplestore, Ontology Engineering and Semantic Tools, Pipeline)
+* Nathan Dunn LBL (Tools, AGR integration)
+* Ben Good LBL (Noctua, Pathway integration)
+* Marcin Joachimiak LBL, (Bioinformatics)
+* HyeongSik Kim LBL (OWL, Solr)
+* Chris Mungall LBL (PI)
+* Deepak Unni LBL (BioLink API)
+* Laurent-Phillippe Albou USC (LBL affiliate) (Bioinformatics, Networks)
+* Dustin Ebert USC (Pipeline, GO-CAMs)
+* Huaiyu Mi USC (Panther, PAINT Pipeline)
+* Tremayne Mushayahama USC (Noctua)
+* Anushya Muruganujan USC (Panther, PAINT, Enrichment)
+* Jim Balhoff RENCI (Noctua, Ontology Engineering)
+==Wiki==
+All software-and-utilities pages on the wiki should go in the wikispace SWUG (SoftWare Utilities Group)
+==Projects==
+All projects are managed via GitHub projects. For a list of all, see the [https://github.com/orgs/geneontology/projects GO github projects page]
+=== GitHub Repos ===
+* https://github.com/geneontology/noctua
+* https://github.com/geneontology/amigo
+* https://github.com/biolink/ontobio/
+* https://github.com/owlcollab/owltools
+===AmiGO===
+* https://github.com/geneontology/amigo
+* [[AmiGO_Manual:_Overview]]
+* [[AmiGO_Manual:_Installation]]
+* [http://sourceforge.net/tracker/?group_id=36855&atid=494390 AmiGO Requests]
+* [http://sourceforge.net/tracker/?group_id=36855&atid=908269 AmiGO bug reports]
+===Noctua===
+* [[Noctua]] Curator docs
+* https://github.com/geneontology/noctua
+* [https://docs.google.com/document/d/1w3mkF1RQIzwROOCMTkqjYaOn8ZbdsW52t-xA4DKt0vg/edit#heading=h.du3v9zif59jp Noctua Technical Stack]