Software and Utilities: Difference between revisions
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[[Category:Software]] [[Category:Working Groups]] | [[Category:Software]] [[Category:Working Groups]] | ||
[[Software and Utilities group summary]] | For the legacy page, see [[Software_and_Utilities_(Archived)]] and [[Software and Utilities group summary]] | ||
==Meetings== | ==Meetings== | ||
See | See the GO calendar | ||
* | * biweekly all-day thursday LBL hack days (anyone can zoom in) | ||
* biweekly Noctua calls | |||
* adhoc zooms between developers as needed | |||
* updates on go-managers calls | |||
* | |||
* | |||
* | |||
==Mail List== | ==Mail List== | ||
* godev-internal on groups.io | |||
==Resources== | ==Resources== | ||
Line 69: | Line 21: | ||
===Documentation=== | ===Documentation=== | ||
===Trackers=== | ===Trackers=== | ||
===People=== | |||
* | |||
* | The following people dedicate some portion of their time to the GO project | ||
* | |||
* | * Seth Carbon LBL (Manager, Noctua, AmiGO, Infrastructure) | ||
* | * Eric Douglass LBL (Triplestore, Ontology and Semantic Tools, Pipeline) | ||
* Nathan Dunn LBL (Tools, AGR integration) | |||
* Ben Good LBL (Noctua, Pathway integration) | |||
* Marcin Joachimiak LBL, (Bioinformatics) | |||
* HyeongSik Kim LBL (OWL) | |||
* Suzanna Lewis LBL (PI) | |||
* Chris Mungall LBL (Lead) | |||
* Deepak Unni LBL (BioLink API) | |||
* Laurent-Phillippe Albou USC (LBL affiliate) (Bioinformatics, Networks) | |||
* Dustin Ebert USC (Pipeline, GO-CAMs) | |||
* Huaiyu Mi USC (Panther, PAINT Pipeline) | |||
* Tremayne Mushayahama USC (Noctua) | |||
* Anushya Muruganujan USC (Panther, PAINT, Enrichment) | |||
* | * Jim Balhoff RENCI (Noctua, Ontology) | ||
===Principles=== | ===Principles=== | ||
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All software-and-utilities pages on the wiki should go in the wikispace SWUG (SoftWare Utilities Group) | All software-and-utilities pages on the wiki should go in the wikispace SWUG (SoftWare Utilities Group) | ||
==Projects== | ==Projects== | ||
All projects are managed via GitHub projects. For a list of all, see the [https://github.com/orgs/geneontology/projects GO github projects page] | |||
=== GitHub Repos === | |||
* https://github.com/geneontology/noctua | |||
* https://github.com/geneontology/amigo | |||
* | * https://github.com/biolink/ontobio/ | ||
* https://github.com/owlcollab/owltools | |||
* | |||
* | |||
===AmiGO=== | ===AmiGO=== | ||
* https://github.com/geneontology/amigo | |||
* [[AmiGO_Manual:_Overview]] | * [[AmiGO_Manual:_Overview]] | ||
* [[AmiGO_Manual:_Installation]] | * [[AmiGO_Manual:_Installation]] | ||
Line 119: | Line 74: | ||
* [http://sourceforge.net/tracker/?group_id=36855&atid=908269 AmiGO bug reports] | * [http://sourceforge.net/tracker/?group_id=36855&atid=908269 AmiGO bug reports] | ||
==== | ===Noctua=== | ||
* [[Noctua]] Curator docs | |||
* https://github.com/geneontology/noctua | |||
* [https://docs.google.com/document/d/1w3mkF1RQIzwROOCMTkqjYaOn8ZbdsW52t-xA4DKt0vg/edit#heading=h.du3v9zif59jp Noctua Technical Stack] |
Revision as of 15:54, 10 March 2018
For the legacy page, see Software_and_Utilities_(Archived) and Software and Utilities group summary
Meetings
See the GO calendar
- biweekly all-day thursday LBL hack days (anyone can zoom in)
- biweekly Noctua calls
- adhoc zooms between developers as needed
- updates on go-managers calls
Mail List
- godev-internal on groups.io
Resources
Documentation
Trackers
People
The following people dedicate some portion of their time to the GO project
- Seth Carbon LBL (Manager, Noctua, AmiGO, Infrastructure)
- Eric Douglass LBL (Triplestore, Ontology and Semantic Tools, Pipeline)
- Nathan Dunn LBL (Tools, AGR integration)
- Ben Good LBL (Noctua, Pathway integration)
- Marcin Joachimiak LBL, (Bioinformatics)
- HyeongSik Kim LBL (OWL)
- Suzanna Lewis LBL (PI)
- Chris Mungall LBL (Lead)
- Deepak Unni LBL (BioLink API)
- Laurent-Phillippe Albou USC (LBL affiliate) (Bioinformatics, Networks)
- Dustin Ebert USC (Pipeline, GO-CAMs)
- Huaiyu Mi USC (Panther, PAINT Pipeline)
- Tremayne Mushayahama USC (Noctua)
- Anushya Muruganujan USC (Panther, PAINT, Enrichment)
- Jim Balhoff RENCI (Noctua, Ontology)
Principles
Wiki
All software-and-utilities pages on the wiki should go in the wikispace SWUG (SoftWare Utilities Group)
Projects
All projects are managed via GitHub projects. For a list of all, see the GO github projects page
GitHub Repos
- https://github.com/geneontology/noctua
- https://github.com/geneontology/amigo
- https://github.com/biolink/ontobio/
- https://github.com/owlcollab/owltools
AmiGO
- https://github.com/geneontology/amigo
- AmiGO_Manual:_Overview
- AmiGO_Manual:_Installation
- AmiGO Requests
- AmiGO bug reports