User contributions for Pascale
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27 March 2024
- 11:1811:18, 27 March 2024 diff hist +27 m Projects update meeting 2024-03-27 → Pipeline current
- 11:1111:11, 27 March 2024 diff hist −1 m Projects update meeting 2024-03-27 →| Pipeline
- 11:1011:10, 27 March 2024 diff hist −2 m Projects update meeting 2024-03-27 →Update on projects
- 11:1011:10, 27 March 2024 diff hist +68 m Projects update meeting 2024-03-27 →Update on projects
- 03:2203:22, 27 March 2024 diff hist +2,330 m Ontology meeting 2024-04-08 No edit summary current
26 March 2024
- 11:5411:54, 26 March 2024 diff hist +993 N Projects update meeting 2024-03-27 Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: = Discussion topics = ==GO meeting== * Registration form by March 15th * Agenda by May 1st * Which days do we need on either side? * Draft agenda: https://docs.google.com/document/d/1FwGxa4jx8rJFjWBcbn4Q7ZzOHCY6-oF0azOrtK3quyk/edit#heading=h.2jptrbvdxk9r * GO Users meeting: https://docs.google.com/document/d/1sIamECzTS5IMOy4GeldzWXdawnmOLvT9s5vClMAs3Bo/edit..."
- 11:1411:14, 26 March 2024 diff hist +141 m Rolling build of the Gene Ontology No edit summary current
- 06:2406:24, 26 March 2024 diff hist +93 m Ontology meeting 2024-04-08 →Discussion points
- 06:2406:24, 26 March 2024 diff hist +549 N Ontology meeting 2024-04-08 Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= * Ontobot action to add a term to the 'do not annotate' subset does not create the comment we used to have (something like, "This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term.") ** Should Ontobot also do that? ** Can we/should we add a check t..."
- 06:2106:21, 26 March 2024 diff hist +6 m Ontology meeting 2024-03-25 No edit summary current
- 06:2106:21, 26 March 2024 diff hist +40 m Ontology editors' conference call minutes 2024 No edit summary current
25 March 2024
- 12:1212:12, 25 March 2024 diff hist +268 m Ontology meeting 2024-03-25 No edit summary
- 12:0612:06, 25 March 2024 diff hist +8 m Ontology meeting 2024-03-25 No edit summary
- 12:0312:03, 25 March 2024 diff hist +12 m Ontology meeting 2024-03-25 No edit summary
- 12:0112:01, 25 March 2024 diff hist +8 m Ontology meeting 2024-03-25 No edit summary
- 12:0112:01, 25 March 2024 diff hist +66 m Ontology meeting 2024-03-25 No edit summary
- 04:3804:38, 25 March 2024 diff hist +160 N Ontology meeting 2024-03-25 Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= Category:Meetings"
- 04:3704:37, 25 March 2024 diff hist +41 m Ontology editors' conference call minutes 2024 No edit summary
20 March 2024
- 15:4215:42, 20 March 2024 diff hist +16 m Rolling build of the Gene Ontology No edit summary
- 15:3915:39, 20 March 2024 diff hist +35 m Rolling build of the Gene Ontology →Purpose of the rolling build of GO
- 15:3815:38, 20 March 2024 diff hist +307 m Rolling build of the Gene Ontology No edit summary
- 15:3415:34, 20 March 2024 diff hist 0 m Main Page →Resources for GO annotation contributing groups current
- 15:3315:33, 20 March 2024 diff hist +48 N Daily version of the Gene Ontology Pascale moved page Daily version of the Gene Ontology to Rolling build of the Gene Ontology current Tag: New redirect
- 15:3315:33, 20 March 2024 diff hist 0 m Rolling build of the Gene Ontology Pascale moved page Daily version of the Gene Ontology to Rolling build of the Gene Ontology
19 March 2024
- 14:4414:44, 19 March 2024 diff hist +6 m Rolling build of the Gene Ontology No edit summary
- 14:4214:42, 19 March 2024 diff hist +361 m Rolling build of the Gene Ontology No edit summary
- 14:2614:26, 19 March 2024 diff hist +48 N Rolling build of the Gene Ontology Created page with " Category:OntologyCategory:GO Editors"
- 14:2514:25, 19 March 2024 diff hist +41 m Main Page No edit summary
- 04:1704:17, 19 March 2024 diff hist +176 m Annotation Conf. Call 2024-03-19 No edit summary
18 March 2024
- 13:3913:39, 18 March 2024 diff hist +85 m Adding and Removing GO Subsets (Slims) No edit summary current
- 12:4012:40, 18 March 2024 diff hist +89 m Ontology meeting 2024-03-18 →Document how to add terms in batch to a do-not-annotate subset directly from the github web interface current
- 12:3612:36, 18 March 2024 diff hist +203 m Ontology meeting 2024-03-18 →ChEBI 7.3 terms
- 12:3012:30, 18 March 2024 diff hist −2 m Ontology meeting 2024-03-18 →ChEBI 7.3 terms
- 06:0806:08, 18 March 2024 diff hist +49 m Interpretation of Travis checks errors No edit summary current
- 06:0706:07, 18 March 2024 diff hist 0 N File:Travis error inferences diff.png No edit summary current
- 06:0606:06, 18 March 2024 diff hist +308 m Interpretation of Travis checks errors No edit summary
- 04:4704:47, 18 March 2024 diff hist +91 m Adding and Removing GO Subsets (Slims) →Removing a subset
15 March 2024
- 12:0812:08, 15 March 2024 diff hist +365 m Ontology meeting 2024-03-18 →Discussion points
- 11:1811:18, 15 March 2024 diff hist +78 m Ontology editors' manual →Useful references current
- 08:0108:01, 15 March 2024 diff hist 0 m Ontology meeting 2024-03-18 No edit summary
- 07:5307:53, 15 March 2024 diff hist +114 m Ontology meeting 2024-03-18 →Using an ensemble of LLMs to evaluate GO-RHEA mappings
- 06:3406:34, 15 March 2024 diff hist +1 m Adding and Removing GO Subsets (Slims) No edit summary
- 05:5705:57, 15 March 2024 diff hist −3 m GO slim overhaul (completed 2009) →REDONE 2023 current
- 05:5705:57, 15 March 2024 diff hist +28 m GO slim overhaul (completed 2009) No edit summary
- 05:5705:57, 15 March 2024 diff hist +14 m GO slim overhaul (completed 2009) No edit summary
- 05:5605:56, 15 March 2024 diff hist +178 m GO slim overhaul (completed 2009) No edit summary
- 05:5605:56, 15 March 2024 diff hist +134 m GO slim overhaul (completed 2009) No edit summary
- 05:5105:51, 15 March 2024 diff hist +220 m Procedure to check subset coverage No edit summary current
- 05:4705:47, 15 March 2024 diff hist +782 m Procedure to check subset coverage No edit summary
- 05:4105:41, 15 March 2024 diff hist +808 N Procedure to check subset coverage Created page with "# Checking GO annotation coverage #* Go to [https://www.ebi.ac.uk/QuickGO/ QuickGO], click on [https://www.ebi.ac.uk/QuickGO/annotations View Annotations] #* On the drop down menus at the top of the page, add filters as appropriate: #** Taxon(s) or taxonomic range (it is possible to select for example NBCITaxon:2 for all bacteria) #** Gene Products: it is usually desirable to select only Reviewed entry and Reference proteomes (either "Gene centric, canonical", or "Gene..."