User contributions for Paul Thomas
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10 April 2013
- 11:5811:58, 10 April 2013 diff hist +405 2013 Cambridge GOC Meeting Agenda No edit summary
29 March 2013
- 14:1214:12, 29 March 2013 diff hist +39 2013 Cambridge GOC Meeting Agenda →Biological Knowledge
- 14:0914:09, 29 March 2013 diff hist +125 2013 Cambridge GOC Meeting Agenda →Biological Knowledge
20 February 2013
- 12:3812:38, 20 February 2013 diff hist +50 2013 Cambridge GOC Meeting Agenda →Biological Knowledge
6 February 2013
16 December 2012
- 16:4016:40, 16 December 2012 diff hist +3,229 N Reference Genome progress report for 2012 Created page with "Aim 3. We will perform phylogenetically-based propagation of annotations. There are two main parts to this aim: (1) creating the infrastructure required to support phylogenetic ..."
13 December 2012
- 15:1615:16, 13 December 2012 diff hist −51 PAINT User Guide →Submitting PAINT annotations to the GO database using SVN
- 14:4414:44, 13 December 2012 diff hist +56 PAINT User Guide →Submitting PAINT annotations to the GO database using SVN
- 14:4214:42, 13 December 2012 diff hist +337 PAINT User Guide →Submitting PAINT annotations to the GO database using SVN
- 14:2514:25, 13 December 2012 diff hist +635 PAINT User Guide →Submitting PAINT annotations to the GO database using SVN
- 14:0514:05, 13 December 2012 diff hist +142 PAINT User Guide →Submitting PAINT annotations to the GO database using SVN
10 December 2012
- 20:0920:09, 10 December 2012 diff hist +4 PAINT User Guide →Summary
- 20:0920:09, 10 December 2012 diff hist +61 PAINT User Guide →Summary
- 17:0017:00, 10 December 2012 diff hist +166 PAINT User Guide →Annotation matrix
- 16:5616:56, 10 December 2012 diff hist +1 PAINT User Guide →Annotation matrix
- 16:5616:56, 10 December 2012 diff hist +505 PAINT User Guide →Annotation matrix
7 December 2012
- 17:3717:37, 7 December 2012 diff hist −274 PAINT User Guide →Other useful links
- 17:3117:31, 7 December 2012 diff hist −21 PAINT User Guide →Multiple sequence alignment (MSA)
- 17:3017:30, 7 December 2012 diff hist −1,141 PAINT User Guide →Recommended configuration for curation
- 17:2717:27, 7 December 2012 diff hist −162 PAINT User Guide →Known bugs
- 17:2217:22, 7 December 2012 diff hist +12 2012 PAINT No edit summary
- 17:2117:21, 7 December 2012 diff hist 0 2012 PAINT No edit summary
- 17:1817:18, 7 December 2012 diff hist +30 2012 PAINT No edit summary
- 17:1817:18, 7 December 2012 diff hist +31 2012 PAINT No edit summary
- 16:5616:56, 7 December 2012 diff hist −406 2012 PAINT No edit summary
- 16:4916:49, 7 December 2012 diff hist +1 2012 PAINT No edit summary
4 December 2012
- 17:1617:16, 4 December 2012 diff hist +92 2012 PAINT No edit summary
12 November 2012
- 14:3314:33, 12 November 2012 diff hist +31 2012 PAINT workshop Logistics →Attendees
- 14:3114:31, 12 November 2012 diff hist +58 2012 PAINT workshop Logistics →Dates
9 October 2012
- 12:4312:43, 9 October 2012 diff hist +119 2012 GOC Meeting Caltech →Annotation
- 12:2612:26, 9 October 2012 diff hist 0 N File:OverviewOntologyAnnotation.pdf No edit summary current
- 12:2612:26, 9 October 2012 diff hist 0 2012 GOC Meeting Caltech →Annotation via Ontology: Production and Priorities
- 12:2412:24, 9 October 2012 diff hist +4 2012 GOC Meeting Caltech →Annotation via Ontology: Production and Priorities
26 September 2012
- 17:0617:06, 26 September 2012 diff hist +81 2012 Caltech GOC Meeting Logistics Table edited by Paul Thomas via TableEdit
- 12:4412:44, 26 September 2012 diff hist −230 2012 GOC Meeting Caltech No edit summary
- 12:3712:37, 26 September 2012 diff hist −30 2012 GOC Meeting Caltech No edit summary
19 September 2012
- 13:3513:35, 19 September 2012 diff hist +39 2012 Caltech GOC Meeting Logistics Table edited by Paul Thomas via TableEdit
- 13:1413:14, 19 September 2012 diff hist +126 2012 GOC Meeting Caltech No edit summary
- 10:4210:42, 19 September 2012 diff hist −75 2012 GOC Meeting Caltech →Biological Representation - Paul T
7 March 2012
- 13:2213:22, 7 March 2012 diff hist 0 N File:Basic PAINT annotation background.pdf No edit summary current
- 13:2213:22, 7 March 2012 diff hist 0 N File:Current and proposed annotation flow.pdf No edit summary current
- 13:2113:21, 7 March 2012 diff hist 0 N File:Enhanced expressivity.pdf No edit summary current
- 13:2013:20, 7 March 2012 diff hist 0 N File:Survey summary 3E thru 4.pdf No edit summary current
- 13:2013:20, 7 March 2012 diff hist +126 2012 Annotation Meeting Stanford →Concurrent sessions (4 hr)
- 13:1813:18, 7 March 2012 diff hist −168 2012 Annotation Meeting Stanford →Vision for GO annotation process
- 13:1513:15, 7 March 2012 diff hist +51 2012 Annotation Meeting Stanford →Proposal for GOC use of common annotation framework to support literature annotation and subsequent phylogenetic annotation process
- 13:1313:13, 7 March 2012 diff hist +64 2012 Annotation Meeting Stanford →Current GO annotation status
- 13:1013:10, 7 March 2012 diff hist −14 Consortium Meetings and Workshops →2012
15 February 2012
- 14:2814:28, 15 February 2012 diff hist −7 2012 Annotation Meeting Stanford →Case studies of state-of-the-art annotation approaches
- 14:0414:04, 15 February 2012 diff hist −1,140 2012 Annotation Meeting Stanford No edit summary
30 January 2012
- 19:2119:21, 30 January 2012 diff hist +40 2012 Stanford Annotation Meeting Logistics →Attendees
- 19:2019:20, 30 January 2012 diff hist +42 2012 Stanford Annotation Meeting Logistics No edit summary
19 January 2012
- 12:4612:46, 19 January 2012 diff hist +36 Hinxton OBO-Edit/Protege 4 workshop Jan 2012 No edit summary
11 January 2012
- 13:5913:59, 11 January 2012 diff hist +72 2012 Annotation Meeting Stanford →Preparation needed in advance of GO Consortium meeting
21 December 2011
- 14:2014:20, 21 December 2011 diff hist −31 2012 Annotation Meeting Stanford →Goals
- 13:5713:57, 21 December 2011 diff hist +607 2012 Annotation Meeting Stanford →Preparation needed in advance of GO Consortium meeting (incomplete, see agenda)
14 December 2011
- 15:0515:05, 14 December 2011 diff hist −843 2012 Annotation Meeting Stanford →Agenda
- 15:0515:05, 14 December 2011 diff hist −361 2012 Annotation Meeting Stanford →Goals
- 14:5114:51, 14 December 2011 diff hist −745 2012 Annotation Meeting Stanford →Preparation needed in advance of GO Consortium meeting
- 14:4614:46, 14 December 2011 diff hist +87 2012 Annotation Meeting Stanford →Discussion: what should the annotation process be?
- 14:4314:43, 14 December 2011 diff hist −2,054 2012 Annotation Meeting Stanford →Specific developments to improve the current GO annotation format
- 14:3614:36, 14 December 2011 diff hist −283 2012 Annotation Meeting Stanford →"How do we become an Efficient Annotation Factory?"
- 14:2614:26, 14 December 2011 diff hist −503 2012 Annotation Meeting Stanford →"How do we become an Efficient Annotation Factory?"
5 November 2011
11 October 2011
- 09:2709:27, 11 October 2011 diff hist +6 PAINT annotation guidelines →Annotating ancestral genes.
- 09:2509:25, 11 October 2011 diff hist +23 PAINT annotation guidelines No edit summary
- 09:2209:22, 11 October 2011 diff hist +75 PAINT annotation guidelines →Annotating ancestral genes.
7 September 2011
- 11:0711:07, 7 September 2011 diff hist +122 Manager 7Sep11 →Agenda
4 August 2011
- 10:2010:20, 4 August 2011 diff hist 0 N File:Paul's LEGO white paper March 2010.pdf No edit summary current
- 10:1910:19, 4 August 2011 diff hist 0 N File:Paul's LEGO presentation from Bar Harbor Sept 2010.pdf No edit summary current
- 10:1810:18, 4 August 2011 diff hist +4 LEGO-style annotation ideas →Useful links
- 10:1810:18, 4 August 2011 diff hist +71 LEGO-style annotation ideas →Useful links
20 May 2011
- 18:2018:20, 20 May 2011 diff hist +32 2011 USC Meeting Agenda →11-noon Wrap up, action items
- 16:4516:45, 20 May 2011 diff hist −2 2011 USC Meeting Agenda →Saturday May 21, University Club, Banquet Room
- 13:1913:19, 20 May 2011 diff hist +3 2011 USC Meeting Agenda No edit summary
- 11:2911:29, 20 May 2011 diff hist +1 2011 USC Meeting Agenda →8:15-12:30 Working Group Reports (cont), plans through 2011, discussion of priorities
- 11:0911:09, 20 May 2011 diff hist +24 2011 USC Meeting Agenda →9:00-10:45 Discussion of the Vision defined in the GOC NIH grant application
- 10:4310:43, 20 May 2011 diff hist +103 2011 USC Meeting Agenda No edit summary
19 May 2011
- 14:1714:17, 19 May 2011 diff hist 0 2011 USC Meeting Agenda →11:15 Evidence Code Ontology presentation
- 14:1714:17, 19 May 2011 diff hist 0 2011 USC Meeting Agenda →11:30 Evidence Code Ontology presentation
- 14:1614:16, 19 May 2011 diff hist +1 2011 USC Meeting Agenda No edit summary
- 13:3013:30, 19 May 2011 diff hist +8 2011 USC Meeting Logistics →Attendees
18 May 2011
- 18:0718:07, 18 May 2011 diff hist +7 2011 USC Meeting Agenda →Group dinner at Rosa Mexicano at LA Live (Downtown LA)
- 17:4917:49, 18 May 2011 diff hist +7 2011 USC Meeting Logistics →Venue
- 17:4917:49, 18 May 2011 diff hist +96 2011 USC Meeting Agenda No edit summary
- 16:5816:58, 18 May 2011 diff hist −123 2011 USC Meeting Agenda →2:45 Phylogenetically-based annotations (Paul T)
- 15:5415:54, 18 May 2011 diff hist +43 2011 USC Meeting Agenda →9:00 Reference Genomes
17 May 2011
- 18:5718:57, 17 May 2011 diff hist +105 2011 USC Meeting Logistics →Lodging Information
- 13:3713:37, 17 May 2011 diff hist −78 2011 USC Meeting Agenda No edit summary
- 13:3713:37, 17 May 2011 diff hist +25 2011 USC Meeting Agenda →11:45 Review Action items
- 13:3613:36, 17 May 2011 diff hist 0 2011 USC Meeting Agenda →Satellite meetings
- 13:3413:34, 17 May 2011 diff hist +10 2011 USC Meeting Agenda →May 19
- 13:3313:33, 17 May 2011 diff hist +255 2011 USC Meeting Agenda No edit summary
- 13:1813:18, 17 May 2011 diff hist +4 2011 USC Meeting Agenda No edit summary
- 13:1513:15, 17 May 2011 diff hist +124 2011 USC Meeting Agenda No edit summary
11 May 2011
- 13:5113:51, 11 May 2011 diff hist +30 2011 USC Meeting Logistics No edit summary
- 13:5013:50, 11 May 2011 diff hist +179 2011 USC Meeting Logistics No edit summary
- 13:4613:46, 11 May 2011 diff hist +309 2011 USC Meeting Logistics No edit summary
- 13:4013:40, 11 May 2011 diff hist +188 2011 USC Meeting Logistics No edit summary
- 13:3313:33, 11 May 2011 diff hist 0 2011 USC Meeting Logistics No edit summary