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- '''Action:''' Rama to look into retiring Stanford go-help email list: 1. 'Vacation message' wh Action: Rama and Mike will discuss this further ...946 bytes (154 words) - 15:39, 27 June 2014
- * Annotation (Rama) ...on group one option is to give Rama extra powers with protein2GO. Pascale, Rama and Kimberly will come up with a list of tasks that we need power for. This ...2 KB (320 words) - 09:51, 15 April 2019
- Seth, Amelia, Rama * Rama's edits to 1.7 announcement ...1 KB (213 words) - 14:59, 1 December 2009
- #1 Literature annotation; (Judy and Rama) #6 Dissemination and outreach (Mike and Rama, Emily, and perhaps Seth to stand in for Chris and really being the front-o ...864 bytes (129 words) - 15:13, 27 June 2014
- Attendance:Chris, Judy, Jane, David, Mike, Kimberley, Pascale, Paul T., Rama, Suzi, Paul S. ...make it better organized. We can do more to educate people right up front. Rama has been heading up the team to rework things with Seth. GO-TOP will discus ...1 KB (258 words) - 15:39, 27 June 2014
- * get rama's rg example queries onto GOOSE example wiki (seth) ...720 bytes (100 words) - 13:56, 24 August 2009
- Rama, Dianna, Rachael, Prudence, Li, Midori, Doug, Becky, Chris, Antonia, Ruth, '''1. GO Mine presentation (Rama)''' ...2 KB (250 words) - 16:28, 9 April 2014
- ...><span style="font-weight:bold;font-family:'Helvetica-Bold';color:#ec0003">rama: </span><span style="font-family:'Helvetica'">hello</span></p> ...><span style="font-weight:bold;font-family:'Helvetica-Bold';color:#ec0003">rama: </span><span style="font-family:'Helvetica'">i was happy with #2. Did ever ...30 KB (3,813 words) - 23:09, 29 February 2008
- ...al;'><font size="2">(08:33:07 AM) </font></span><b><font size="3">rama [<i>rama@cider.Stanford.EDU</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>Good morning</font><br> ...13 KB (1,991 words) - 18:07, 16 July 2014
- Ben, Seth, Rama, Amelia ** Largely unknown, but Rama will be available ...1 KB (195 words) - 12:19, 22 June 2010
- == Things on Rama's list == ...2 KB (277 words) - 20:18, 4 February 2010
- *'''Present''': Rama, Pascale, David, Paul S., Kimberly, Rachael, Chris, Huaiyu, Jane, Suzi Rama, Chris - main task now is to move content across. ...2 KB (380 words) - 15:33, 27 June 2014
- Present: Rachael, Rama, Emily - Rama: perhaps on the main horizaontal list on the GOC pages - instead of documen ...1 KB (225 words) - 16:11, 9 April 2014
- * Pascale started to train Rama to use PAINT. ...165 bytes (20 words) - 10:40, 16 January 2018
- - rama has joined the room rama: morning ...6 KB (1,089 words) - 18:08, 16 July 2014
- Present: Rama, Chris, Paola, Suzi, Judy, PaulT, Kimberly, Huaiyu ...mone to swimming behavior. They claim the sheep growth hormone is similar Rama will talk to agbase folks to clarify before we discuss this further. ...3 KB (466 words) - 09:51, 15 April 2019
- Participants: Suzi, Paul T, Moni, Huaiyu, Rama, Karen ===NOT annotation question from Rama=== ...2 KB (366 words) - 13:08, 20 January 2015
- Participants: Rama, Moni, Karen, Marc, Pascale, Huaiyu * Rama raised the question about refGenome in col 15 in PAINT gaf files. Refgenome ...839 bytes (141 words) - 19:33, 20 February 2015
- *** Rama's list * rama to try another icon mockup ...1 KB (227 words) - 12:33, 15 June 2010
- ...annotation_related mailing list was agreed upon at the last Managers call. Rama will make an announcement about the merge and the merge will potentially ha *Rama is looking into reorganizing the Annotation_documentation section on the GO ...889 bytes (131 words) - 09:17, 15 April 2019
- * Gene mania annotations still being discussed by Rama and Rachel - some concerns were brought up by email. * Rama has been discussing with people form the GeneMania group ...823 bytes (126 words) - 15:38, 27 June 2014
- Present: Rama, Jane, Becky, Paola, Aleks, Tanya, Chris, Suzi, Pascale, Kimberly, Edith, S ...enough) so people can raise their hands on a chat window to make comments. Rama will look into holding these calls via bluejeans (Stanford account). ...2 KB (378 words) - 18:10, 16 January 2015
- Attending: Suzi, Chris, Rama, David H, Huaiyu, Jane, Kimberly ...254 bytes (42 words) - 09:45, 15 April 2019
- Present: Judy, Kara, Pascale, Rachael, Rama, Chris ...We will ask MODs to prepare one and get them on the wiki before Dec 2010. Rama will create a page for GRANT 2010 and add links. ...2 KB (276 words) - 12:19, 27 June 2014
- Seth, Amelia, Rama * Rama said just send mail to group ...756 bytes (121 words) - 23:22, 8 November 2007
- Seth, Amelia, Mary, Chris, Rama, Ben * rama to do a final round for this bug release ...823 bytes (126 words) - 18:13, 17 June 2008
- Rama waiting to hear from Mike. Rama and Pascale to send comments to Rachael. ...2 KB (337 words) - 16:22, 9 April 2014
- Seth, Ben, Chris, Rama. * Rama to see who is available for testing. ...1 KB (156 words) - 11:56, 27 July 2010
- Action: Emily to send Rama email addresses for working groups ...amp and ECO discussion. Move to issues page, to be resolved later. Action: Rama. ...1 KB (168 words) - 16:12, 9 April 2014
- Present: David, Rama, Kimberly, Pascale, Jane, Paul S, Judy ...268 bytes (41 words) - 15:11, 27 June 2014
- Present: Judy, David, Rama, Emily, Paul, Suzi, MikeC ...294 bytes (42 words) - 15:29, 27 June 2014
- ...s are set for the Stanford PAINT workshop. December 10-13th (yes, 4 days). Rama will make a meeting logistics page (for attendees). Seth will work with Rama and Ranjana to come up with what the page should be etc. Ideally we want so ...2 KB (342 words) - 12:16, 27 June 2014
- ===Minting DOIs for GO_REFs (Rama)=== ===Obsoleting relationships (Rama)=== ...4 KB (663 words) - 17:16, 15 July 2015
- *SRS: Rama ...350 bytes (53 words) - 18:44, 8 April 2014
- ATTENDEES: Suzi, Paul T., Huaiyu, Donghui, Rama, David, Tanya, Chris, Jane, Heiko ===Single Step Process terms (Paul, Rama et al)=== ...3 KB (571 words) - 15:38, 1 July 2014
- Seth, Petra, Stacia, Amelia, Chris, Rama, Jane * Rama to send list of WPWGers to Seth ...1 KB (160 words) - 21:16, 27 January 2009
- Rama, Rachael, Chris, Kimberley, David, Huaiyu, Jane, Suzi, Pascale '''ACTION: Rama''' will take a look at what needs to be done and talk to Seth ...3 KB (489 words) - 15:11, 27 June 2014
- Present: Rama, Michelle, Pascale, Harold ...d look for to start making GO annotations. We discussed the flowchart that Rama had sent to the group sometime back (also posted on the wiki). ...1 KB (212 words) - 17:25, 9 April 2014
- Present: Pascale, David, Judy, Emily, Paul S, Rama, Mike C, Chris ==Paper on GAF (Rama)== ...2 KB (382 words) - 15:30, 27 June 2014
- ==Paper on GAF (Rama)== ...2 KB (323 words) - 12:17, 27 June 2014
- ...neontology.org/index.php/Core_Consortium_annotation_activities) (Emily and Rama) ...402 bytes (57 words) - 15:32, 27 June 2014
- **Rama: Now amigo2 is released, now we should make an announcement, and plan on a **Rama updated the wiki page, and will send out the format to the managers. ...1 KB (210 words) - 15:09, 27 June 2014
- Mary, Rama, Chris, Seth, Amelia * rama to try another icon mockup ...1 KB (195 words) - 19:40, 16 March 2010
- * Gene mania annotations still being discussed by Rama and Rachel - some concerns were brought up by email. * Rama has been discussing with people form the GeneMania group ...958 bytes (144 words) - 15:21, 27 June 2014
- Participants: Karen, Rama, Li, Donghui, Suzi, Paul T, Huaiyu *Rama: Val just completed the fission yeast cell cycle pathway. David (Suzi point ...3 KB (443 words) - 14:18, 9 April 2014
- * Here are the links to the models built by David, Kimberly and Rama Rama- http://go-genkisugi.rhcloud.com/seed/model/gomodel:taxon_559292-5525a0fc00 ...3 KB (538 words) - 11:32, 13 May 2015
- - rama has joined the room rama: hi ...10 KB (1,716 words) - 18:07, 16 July 2014
- * rama has joined the room rama: Hello, ...9 KB (1,692 words) - 18:07, 16 July 2014
- Participants: Li, Suzi, Moni, Donghui, Pascale, Karen, Rama *PAINT jamboree participants: Li, Karen, Donghui, Rama, Moni, Huaiyu, Pascale, Mark. Kimberly (?) ...2 KB (349 words) - 15:23, 10 July 2014
- Participants: Rama, Kara, Pascale, Suzi, Judy, Midori, Emily, Chris Rama - communicating with Vinoid from the M.tuberculosis annotation jamboree eff ...4 KB (524 words) - 12:45, 30 June 2014
- ...the [http://www.geneontology.org/GO.annotation_qc.shtml RuleEngine page] (Rama, Amelia), GO taxon contraints reviewed for manual annotations in the GOC, f ...el organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) ...4 KB (534 words) - 10:26, 8 April 2019
- Participants: Li, Rama, Karen, Judy, Paul, Suzi, Huaiyu *Karen and Rama said they had to check the schedule with their families. ...1 KB (217 words) - 19:08, 11 December 2014
- Present: Rama, Kimberly, Chris, David, Huaiyu, PaulT, Suzi * In the context of the Pho80-85 pathway that Rama showed (http://go-genkisugi.rhcloud.com/seed/model/gomodel:sgd-536d71c50000 ...1 KB (244 words) - 20:08, 10 December 2014
- ...annotation sessions (Yasmin has agreed for 'downstream effects'). (Action: Rama) - Rama: sent mail to Chris and Michelle (no response yet) ...1 KB (215 words) - 16:10, 9 April 2014
- Participants: Li, Rama, Suzi, Moni, Huaiyu, Donghui, Paul T., Chris *: - At the last PAINT meeting, during discussion of Rama's question about use of the "Ref Genome" versus "GO Central" sources, Suzi ...3 KB (422 words) - 12:57, 7 March 2019
- '''Participants''': Rama, Moni, Karen, Huaiyu, Pascale, Marc ...201 bytes (22 words) - 12:57, 7 March 2019
- ...on yeast transcription and send their annotations to Rama by 5th November. Rama will collate the annotations and a call-based discussion will happen on 8th ...2 KB (253 words) - 09:16, 15 April 2019
- Kara Dolinski, Pascale Gaudet, Rachel, Jane, David Hill, Rama, Chris, Mike C, Judy, Suzi, Paul Sternberg, Paul Thomas *Updating annotation documentation: Rama. Talking to Amelia about final touches (tabs on pages); text is good to go ...3 KB (411 words) - 15:21, 27 June 2014
- *On call: Chris, Huaiyu, Paola, Rama, Kimberly, Judy, David, Paul T., Pascale **Kimberly, Rama: ...3 KB (553 words) - 09:50, 15 April 2019
- Seth, Amelia, Rama, Ben, Jane * What is release schedule for current bugfix (rama) ...2 KB (345 words) - 21:08, 20 May 2008
- - Rama to send her month's of stats - and Emily to generate first draft web page f ...334 bytes (62 words) - 16:22, 9 April 2014
- Mary, Seth, Amelia, Ben, Rama, Jane *** Rama volunteered ...1 KB (187 words) - 12:04, 19 August 2008
- Emily, Pascale, Rama, Chris, Paul S, Suzi, Judy, David, Paul T * Rama? Make the meeting rota for 2011 ...4 KB (633 words) - 14:39, 27 June 2014
- ...ouple of paint call, present a few families as examples. Huaiyu, Karen and Rama will probably do it. ...412 bytes (68 words) - 13:59, 8 April 2014
- *Rama: We are aware that the UI is not friendly. SGD so far has changed the color *Rama: The software is flexible in that if we have new data (col-16 for example) ...2 KB (391 words) - 12:13, 27 June 2014
- Participants: Rama, Donghui, Moni, Kimberley, Suzi, Huaiyu, Pascale, Li, Paul T ...week of July 28 (28-31). It is likely to be at SGD office at Porter Drive. Rama is going to confirm with Mike. Once the venue is confirmed, Huaiyu will sen ...3 KB (467 words) - 20:46, 29 May 2014
- Meeting canceled since only Rama and David were the only ones attending. ...735 bytes (107 words) - 12:13, 27 June 2014
- rama: cool. thanks Ben rama: I agree. It is clear to me. ...7 KB (1,239 words) - 14:50, 9 April 2014
- 1654525 - Harold, Rama 1646580 - Rama ...5 KB (722 words) - 06:52, 2 April 2009
- Present: PaulT, Heiko, Rama, Kimberly, Huaiyu ...600 bytes (95 words) - 18:01, 3 March 2015
- ...al;'><font size="2">(08:41:12 AM) </font></span><b><font size="3">rama [<i>rama@cider.Stanford.EDU</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>hi there</font><br> ...26 KB (4,000 words) - 18:06, 16 July 2014
- ===PAINT (Rama)=== * Rama is writing a small blurb about the biological phase term for the GOC websit ...3 KB (487 words) - 09:51, 15 April 2019
- Dmitri, Brenley, Suzi, Paola, Susan, Rachael, Ruth, Petra, Rama, Bob '''Action:Rama''' to put on website after Rachael has sent edits ...2 KB (317 words) - 16:35, 9 April 2014
- * Does BioGRID have the same kind of scoring system like IntAct? Rama: So far I don't think so, i will look into it. ...annotations is not looking for assigned_by in protein2GO. Rachael, Petra, Rama, Kimberley will talk about it separately (since this is a protein2GO issue ...3 KB (455 words) - 16:42, 9 April 2014
- * InterPro-source advocated for InterPro2GO etc. Emily to send Rama a draft ...668 bytes (89 words) - 16:24, 9 April 2014
- *Rama: protein2go displays ECO code for evidence. Currently Marcus is the only pe *Rama: We also need a mechanism to alert curators about new ECO codes so we know ...4 KB (745 words) - 09:45, 15 April 2019
- * Almost done. Estimated time: end of this week. ACTION: Rama end email when done * ACTION: Rama will communicate with go-help people about updatings newsfeeds ...2 KB (260 words) - 16:01, 7 April 2014
- <p class="p2"><span class="s6"><a href="irc://irc.macnn.com/rama,isuser"><b>rama: </b></a></span>I tested it briefly and nothing is broken as far as I can t <p class="p6"><span class="s6"><a href="irc://irc.macnn.com/rama,isuser"><b>rama: </b></a></span><a href="http://toy.lbl.gov:9002/cgi-bin/amigo/go.cgi"><spa ...25 KB (4,873 words) - 14:48, 9 April 2014
- gwg: hi Ben, hi Rama rama: hello ...9 KB (1,683 words) - 14:48, 9 April 2014
- ** Rama: is the taxon ID for a specific strain/Ref.proteome or the generic taxon id ** Rama: while we are renaming files we should rename the GOA files too. For e.g. t ...4 KB (650 words) - 02:20, 9 August 2015
- ..."#AB5871">(08:38:09 AM) </font></font><font color="#AB5871"><font size="3">rama:</font></font><font size="3"> no worries</font><br> ..."#AB5871">(08:39:23 AM) </font></font><font color="#AB5871"><font size="3">rama:</font></font><font size="3"> we are waiting for?</font><br> ...26 KB (4,130 words) - 22:19, 8 November 2007
- Michael, Pascale, Rama, Siddartha, Chris, Seth ...802 bytes (121 words) - 13:45, 25 November 2008
- Participants: Kara, Jane, Rama, Chris, Suzi, Mike, Pascale Agenda: Rama ...2 KB (323 words) - 15:21, 27 June 2014
- * SGD: Rama, Julie # HTP: Rama Balakrishnan (Wiki page: [[2010_GO_camp_Annotation_of_HTP_data]]) ...2 KB (289 words) - 11:20, 16 January 2018
- * Rama: remove publications guidelines from main GO website * Rama: add publication guidelines in the wiki (with a disclaimer that this is int ...3 KB (414 words) - 17:16, 15 July 2015
- **Rama: EBI SRS ...680 bytes (99 words) - 18:44, 8 April 2014
- ...al;'><font size="2">(08:30:45 AM) </font></span><b><font size="3">rama [<i>rama@cider.Stanford.EDU</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>hello</font><br> ...37 KB (5,630 words) - 18:06, 16 July 2014
- Present: Rama, Li, Moni, Suzi, Huaiyu, Karen * Rama said that it was OK for users to add the link to the page. ...2 KB (348 words) - 12:03, 8 April 2014
- - Association file Readme updates (Rama)- oops, i was thinking of a SOP document that we put together some time bac *Rama- High-throughput working group ...2 KB (308 words) - 16:11, 9 April 2014
- * Rama: Document cron job for trees * Rama: Everyone needs to communicate to the software team to upload the MF-BP inf ...3 KB (461 words) - 11:14, 16 January 2018
- Rama about these and we have both spot-checked quite a few of the in column 16. Rama and I feel that these mistakes could be corrected ...3 KB (534 words) - 15:19, 27 June 2014
- 1669585 Rama, Rob, Val 1237306 Rama, Rob, Val, Simon ...3 KB (447 words) - 07:06, 2 April 2009
- Seth, Ben, Rama ...552 bytes (70 words) - 21:06, 18 March 2008
- ...Ontology by Computer [[Evidence for Inferences based on Ontology links]] (Rama) SGD: Rama, Jodi<br> ...4 KB (651 words) - 16:33, 9 April 2014
- #Develop proposal for annotation process (Suzi, Harold, Rama, Emily, Kimberly, Paul) #**Prioritization, e.g. biological domain focus (Suzi, Emily, Rama) ...3 KB (484 words) - 16:13, 1 July 2014
- * SGD: Rama Rama, Li, Dmitry, and maybe others will start doing tree annotations. In Decembe ...2 KB (389 words) - 11:15, 16 January 2018
- Present: Rama, Birgit, Sandra, JudyB, Harold, Kimberly, Chris, Ruth, Pascale * Rama: Considering that you guys and protein2GO are neighbors, why aren't you usi ...6 KB (1,022 words) - 03:26, 13 September 2023
- Participants: Rama, Donghui, Paul T, Moni, Judy, Kimberley, Suzi, Huaiyu, Pascale, Karen, Chri *Rama and Judy - More useful and efficient to have everyone together in the same ...4 KB (702 words) - 18:53, 23 May 2014
- Present: Suzi, Judy(for 10 min), PaulT, Huaiyu, Rama, Pascale, Jane, Kimberley, Rachael, David, Chris * MoonProt DB: Rama gave an overview of GO/how to make annotations to the MoonProt group over w ...2 KB (392 words) - 15:09, 27 June 2014
- Present: Kimberly, Rama, Huaiyu, Rachael, Jane, Paul T. **Group from NTNU (Norway) in collaboration with Rama, Karen, Rachael, Judy et al. have submitted a paper on transcription factor ...2 KB (358 words) - 12:15, 27 June 2014