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- - Write to all mailing lists to announce merge. Rama to check with Mike whether we should sign up or be automatically signed up. - Rama will send out email ...541 bytes (93 words) - 16:10, 9 April 2014
- - ACTION for Rama. GO Camp: Need to collect all talks and summary slides on wiki page and put ...Proposal to close all mailing lists and have one annotation mailing list. Rama to send email to Manager's list to propose merging certain mailing lists. S ...1 KB (178 words) - 16:23, 9 April 2014
- Seth, Amelia, Rama, Ben * Gather data files for automated testing (Seth and Rama) ...948 bytes (138 words) - 12:55, 25 August 2009
- ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>seth?</font><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>okay. sounds good. bye</font><br> ...1 KB (218 words) - 18:06, 16 July 2014
- * Discuss Roadmap for Annotation Advocacy group (rama) | ...ce code ECO proposal- who should take the initiative to move this forward (Rama) ...660 bytes (99 words) - 16:13, 9 April 2014
- Seth, Pascale, Amelia, Rama, Chris, Eurie * get rama's rg example queries onto GOOSE example wiki (seth) ...629 bytes (84 words) - 13:50, 24 March 2009
- ...QCs for filtering script, can go in Mike's script, send email to GO list. Rama to document soft QC checks from GO camp. Rama to send mail to Mike about email lists. Make new list GO Discussions or use ...755 bytes (129 words) - 16:13, 9 April 2014
- Rama, Seth. * get rama's rg example queries onto GOOSE example wiki (seth) ...810 bytes (112 words) - 11:49, 26 May 2009
- Jane, Seth, Pascale, Amelia, Rama * take a quick look at GOOSE on new site (Rama) ...1 KB (220 words) - 12:13, 28 April 2009
- Chris, Jane, Ben, Amelia, Seth, Rama, Edith ** Big testing push: amelia, jane, rama ...2 KB (243 words) - 12:11, 1 September 2009
- ...) [Working group to be established; including Harold and Amelia]. Manager: Rama and Emily ...working group to investigate revamp of evidence codes. Manager: Emily and Rama ...2 KB (250 words) - 20:37, 8 April 2014
- - rama has joined the room rama: hello ...3 KB (461 words) - 11:53, 27 July 2010
- == InterOntology links / annotations - Rama, Tanya, David email== ...260 bytes (32 words) - 16:12, 9 April 2014
- **Files are in CVS now. Rama will follow up with Chris to see if an email can be fired when new files ge * ECO proposal -sent mail to Chris and Michelle (no response yet)- Rama will follow up with Chris etc. Possibly wrap into Chain of evidence proposa ...2 KB (266 words) - 16:23, 9 April 2014
- # A summary email of of the chat, combined with Ben and Rama's comments, will be sent out for further discussion ...546 bytes (81 words) - 22:18, 8 November 2007
- Mary, Rama, Ben, Seth, Amelia * get rama's rg example queries onto GOOSE example wiki (seth) ...1 KB (151 words) - 12:35, 2 June 2009
- ** Rama and Emily send summary of txn and apoptosis case studies ** Paul, Emily, Harold Rama will meet to talk about what is the minimum requirement for annotations ...720 bytes (111 words) - 12:14, 27 June 2014
- ...) [Working group to be established; including Harold and Amelia]. Manager: Rama and Emily. ...working group to investigate revamp of evidence codes. Manager: Emily and Rama ...2 KB (357 words) - 16:12, 9 April 2014
- * get rama's rg example queries onto GOOSE example wiki (seth) ...674 bytes (90 words) - 19:01, 22 June 2009
- * Rama will look into adding more details to this pathway by next meeting. * Rama- how is this tool going to be used by curators? Curator time is limited and ...1 KB (181 words) - 17:58, 2 February 2015
- '''Action:''' Rama to look into retiring Stanford go-help email list: 1. 'Vacation message' wh Action: Rama and Mike will discuss this further ...946 bytes (154 words) - 15:39, 27 June 2014
- * Annotation (Rama) ...on group one option is to give Rama extra powers with protein2GO. Pascale, Rama and Kimberly will come up with a list of tasks that we need power for. This ...2 KB (320 words) - 09:51, 15 April 2019
- Seth, Amelia, Rama * Rama's edits to 1.7 announcement ...1 KB (213 words) - 14:59, 1 December 2009
- #1 Literature annotation; (Judy and Rama) #6 Dissemination and outreach (Mike and Rama, Emily, and perhaps Seth to stand in for Chris and really being the front-o ...864 bytes (129 words) - 15:13, 27 June 2014
- Attendance:Chris, Judy, Jane, David, Mike, Kimberley, Pascale, Paul T., Rama, Suzi, Paul S. ...make it better organized. We can do more to educate people right up front. Rama has been heading up the team to rework things with Seth. GO-TOP will discus ...1 KB (258 words) - 15:39, 27 June 2014
- * get rama's rg example queries onto GOOSE example wiki (seth) ...720 bytes (100 words) - 13:56, 24 August 2009
- Rama, Dianna, Rachael, Prudence, Li, Midori, Doug, Becky, Chris, Antonia, Ruth, '''1. GO Mine presentation (Rama)''' ...2 KB (250 words) - 16:28, 9 April 2014
- ...><span style="font-weight:bold;font-family:'Helvetica-Bold';color:#ec0003">rama: </span><span style="font-family:'Helvetica'">hello</span></p> ...><span style="font-weight:bold;font-family:'Helvetica-Bold';color:#ec0003">rama: </span><span style="font-family:'Helvetica'">i was happy with #2. Did ever ...30 KB (3,813 words) - 23:09, 29 February 2008
- ...al;'><font size="2">(08:33:07 AM) </font></span><b><font size="3">rama [<i>rama@cider.Stanford.EDU</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>Good morning</font><br> ...13 KB (1,991 words) - 18:07, 16 July 2014
- Ben, Seth, Rama, Amelia ** Largely unknown, but Rama will be available ...1 KB (195 words) - 12:19, 22 June 2010
- == Things on Rama's list == ...2 KB (277 words) - 20:18, 4 February 2010
- *'''Present''': Rama, Pascale, David, Paul S., Kimberly, Rachael, Chris, Huaiyu, Jane, Suzi Rama, Chris - main task now is to move content across. ...2 KB (380 words) - 15:33, 27 June 2014
- Present: Rachael, Rama, Emily - Rama: perhaps on the main horizaontal list on the GOC pages - instead of documen ...1 KB (225 words) - 16:11, 9 April 2014
- * Pascale started to train Rama to use PAINT. ...165 bytes (20 words) - 10:40, 16 January 2018
- - rama has joined the room rama: morning ...6 KB (1,089 words) - 18:08, 16 July 2014
- Present: Rama, Chris, Paola, Suzi, Judy, PaulT, Kimberly, Huaiyu ...mone to swimming behavior. They claim the sheep growth hormone is similar Rama will talk to agbase folks to clarify before we discuss this further. ...3 KB (466 words) - 09:51, 15 April 2019
- Participants: Suzi, Paul T, Moni, Huaiyu, Rama, Karen ===NOT annotation question from Rama=== ...2 KB (366 words) - 13:08, 20 January 2015
- Participants: Rama, Moni, Karen, Marc, Pascale, Huaiyu * Rama raised the question about refGenome in col 15 in PAINT gaf files. Refgenome ...839 bytes (141 words) - 19:33, 20 February 2015
- *** Rama's list * rama to try another icon mockup ...1 KB (227 words) - 12:33, 15 June 2010
- ...annotation_related mailing list was agreed upon at the last Managers call. Rama will make an announcement about the merge and the merge will potentially ha *Rama is looking into reorganizing the Annotation_documentation section on the GO ...889 bytes (131 words) - 09:17, 15 April 2019
- * Gene mania annotations still being discussed by Rama and Rachel - some concerns were brought up by email. * Rama has been discussing with people form the GeneMania group ...823 bytes (126 words) - 15:38, 27 June 2014
- Present: Rama, Jane, Becky, Paola, Aleks, Tanya, Chris, Suzi, Pascale, Kimberly, Edith, S ...enough) so people can raise their hands on a chat window to make comments. Rama will look into holding these calls via bluejeans (Stanford account). ...2 KB (378 words) - 18:10, 16 January 2015
- Attending: Suzi, Chris, Rama, David H, Huaiyu, Jane, Kimberly ...254 bytes (42 words) - 09:45, 15 April 2019
- Present: Judy, Kara, Pascale, Rachael, Rama, Chris ...We will ask MODs to prepare one and get them on the wiki before Dec 2010. Rama will create a page for GRANT 2010 and add links. ...2 KB (276 words) - 12:19, 27 June 2014
- Seth, Amelia, Rama * Rama said just send mail to group ...756 bytes (121 words) - 23:22, 8 November 2007
- Seth, Amelia, Mary, Chris, Rama, Ben * rama to do a final round for this bug release ...823 bytes (126 words) - 18:13, 17 June 2008
- Rama waiting to hear from Mike. Rama and Pascale to send comments to Rachael. ...2 KB (337 words) - 16:22, 9 April 2014
- Seth, Ben, Chris, Rama. * Rama to see who is available for testing. ...1 KB (156 words) - 11:56, 27 July 2010
- Action: Emily to send Rama email addresses for working groups ...amp and ECO discussion. Move to issues page, to be resolved later. Action: Rama. ...1 KB (168 words) - 16:12, 9 April 2014
- Present: David, Rama, Kimberly, Pascale, Jane, Paul S, Judy ...268 bytes (41 words) - 15:11, 27 June 2014
- Present: Judy, David, Rama, Emily, Paul, Suzi, MikeC ...294 bytes (42 words) - 15:29, 27 June 2014
- ...s are set for the Stanford PAINT workshop. December 10-13th (yes, 4 days). Rama will make a meeting logistics page (for attendees). Seth will work with Rama and Ranjana to come up with what the page should be etc. Ideally we want so ...2 KB (342 words) - 12:16, 27 June 2014
- ===Minting DOIs for GO_REFs (Rama)=== ===Obsoleting relationships (Rama)=== ...4 KB (663 words) - 17:16, 15 July 2015
- *SRS: Rama ...350 bytes (53 words) - 18:44, 8 April 2014
- ATTENDEES: Suzi, Paul T., Huaiyu, Donghui, Rama, David, Tanya, Chris, Jane, Heiko ===Single Step Process terms (Paul, Rama et al)=== ...3 KB (571 words) - 15:38, 1 July 2014
- Seth, Petra, Stacia, Amelia, Chris, Rama, Jane * Rama to send list of WPWGers to Seth ...1 KB (160 words) - 21:16, 27 January 2009
- Rama, Rachael, Chris, Kimberley, David, Huaiyu, Jane, Suzi, Pascale '''ACTION: Rama''' will take a look at what needs to be done and talk to Seth ...3 KB (489 words) - 15:11, 27 June 2014
- Present: Rama, Michelle, Pascale, Harold ...d look for to start making GO annotations. We discussed the flowchart that Rama had sent to the group sometime back (also posted on the wiki). ...1 KB (212 words) - 17:25, 9 April 2014
- Present: Pascale, David, Judy, Emily, Paul S, Rama, Mike C, Chris ==Paper on GAF (Rama)== ...2 KB (382 words) - 15:30, 27 June 2014
- ==Paper on GAF (Rama)== ...2 KB (323 words) - 12:17, 27 June 2014
- ...neontology.org/index.php/Core_Consortium_annotation_activities) (Emily and Rama) ...402 bytes (57 words) - 15:32, 27 June 2014
- **Rama: Now amigo2 is released, now we should make an announcement, and plan on a **Rama updated the wiki page, and will send out the format to the managers. ...1 KB (210 words) - 15:09, 27 June 2014
- Mary, Rama, Chris, Seth, Amelia * rama to try another icon mockup ...1 KB (195 words) - 19:40, 16 March 2010
- * Gene mania annotations still being discussed by Rama and Rachel - some concerns were brought up by email. * Rama has been discussing with people form the GeneMania group ...958 bytes (144 words) - 15:21, 27 June 2014
- Participants: Karen, Rama, Li, Donghui, Suzi, Paul T, Huaiyu *Rama: Val just completed the fission yeast cell cycle pathway. David (Suzi point ...3 KB (443 words) - 14:18, 9 April 2014
- * Here are the links to the models built by David, Kimberly and Rama Rama- http://go-genkisugi.rhcloud.com/seed/model/gomodel:taxon_559292-5525a0fc00 ...3 KB (538 words) - 11:32, 13 May 2015
- - rama has joined the room rama: hi ...10 KB (1,716 words) - 18:07, 16 July 2014
- * rama has joined the room rama: Hello, ...9 KB (1,692 words) - 18:07, 16 July 2014
- Participants: Li, Suzi, Moni, Donghui, Pascale, Karen, Rama *PAINT jamboree participants: Li, Karen, Donghui, Rama, Moni, Huaiyu, Pascale, Mark. Kimberly (?) ...2 KB (349 words) - 15:23, 10 July 2014
- Participants: Rama, Kara, Pascale, Suzi, Judy, Midori, Emily, Chris Rama - communicating with Vinoid from the M.tuberculosis annotation jamboree eff ...4 KB (524 words) - 12:45, 30 June 2014
- ...the [http://www.geneontology.org/GO.annotation_qc.shtml RuleEngine page] (Rama, Amelia), GO taxon contraints reviewed for manual annotations in the GOC, f ...el organisation of pages (Rama, Emily, Rachael, Harold?) and page display (Rama and Amelia) ...4 KB (534 words) - 10:26, 8 April 2019
- Participants: Li, Rama, Karen, Judy, Paul, Suzi, Huaiyu *Karen and Rama said they had to check the schedule with their families. ...1 KB (217 words) - 19:08, 11 December 2014
- Present: Rama, Kimberly, Chris, David, Huaiyu, PaulT, Suzi * In the context of the Pho80-85 pathway that Rama showed (http://go-genkisugi.rhcloud.com/seed/model/gomodel:sgd-536d71c50000 ...1 KB (244 words) - 20:08, 10 December 2014
- ...annotation sessions (Yasmin has agreed for 'downstream effects'). (Action: Rama) - Rama: sent mail to Chris and Michelle (no response yet) ...1 KB (215 words) - 16:10, 9 April 2014
- Participants: Li, Rama, Suzi, Moni, Huaiyu, Donghui, Paul T., Chris *: - At the last PAINT meeting, during discussion of Rama's question about use of the "Ref Genome" versus "GO Central" sources, Suzi ...3 KB (422 words) - 12:57, 7 March 2019
- '''Participants''': Rama, Moni, Karen, Huaiyu, Pascale, Marc ...201 bytes (22 words) - 12:57, 7 March 2019
- ...on yeast transcription and send their annotations to Rama by 5th November. Rama will collate the annotations and a call-based discussion will happen on 8th ...2 KB (253 words) - 09:16, 15 April 2019
- Kara Dolinski, Pascale Gaudet, Rachel, Jane, David Hill, Rama, Chris, Mike C, Judy, Suzi, Paul Sternberg, Paul Thomas *Updating annotation documentation: Rama. Talking to Amelia about final touches (tabs on pages); text is good to go ...3 KB (411 words) - 15:21, 27 June 2014
- *On call: Chris, Huaiyu, Paola, Rama, Kimberly, Judy, David, Paul T., Pascale **Kimberly, Rama: ...3 KB (553 words) - 09:50, 15 April 2019
- Seth, Amelia, Rama, Ben, Jane * What is release schedule for current bugfix (rama) ...2 KB (345 words) - 21:08, 20 May 2008
- - Rama to send her month's of stats - and Emily to generate first draft web page f ...334 bytes (62 words) - 16:22, 9 April 2014
- Mary, Seth, Amelia, Ben, Rama, Jane *** Rama volunteered ...1 KB (187 words) - 12:04, 19 August 2008
- Emily, Pascale, Rama, Chris, Paul S, Suzi, Judy, David, Paul T * Rama? Make the meeting rota for 2011 ...4 KB (633 words) - 14:39, 27 June 2014
- ...ouple of paint call, present a few families as examples. Huaiyu, Karen and Rama will probably do it. ...412 bytes (68 words) - 13:59, 8 April 2014
- *Rama: We are aware that the UI is not friendly. SGD so far has changed the color *Rama: The software is flexible in that if we have new data (col-16 for example) ...2 KB (391 words) - 12:13, 27 June 2014
- Participants: Rama, Donghui, Moni, Kimberley, Suzi, Huaiyu, Pascale, Li, Paul T ...week of July 28 (28-31). It is likely to be at SGD office at Porter Drive. Rama is going to confirm with Mike. Once the venue is confirmed, Huaiyu will sen ...3 KB (467 words) - 20:46, 29 May 2014
- Meeting canceled since only Rama and David were the only ones attending. ...735 bytes (107 words) - 12:13, 27 June 2014
- rama: cool. thanks Ben rama: I agree. It is clear to me. ...7 KB (1,239 words) - 14:50, 9 April 2014
- 1654525 - Harold, Rama 1646580 - Rama ...5 KB (722 words) - 06:52, 2 April 2009
- Present: PaulT, Heiko, Rama, Kimberly, Huaiyu ...600 bytes (95 words) - 18:01, 3 March 2015
- ...al;'><font size="2">(08:41:12 AM) </font></span><b><font size="3">rama [<i>rama@cider.Stanford.EDU</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>hi there</font><br> ...26 KB (4,000 words) - 18:06, 16 July 2014
- ===PAINT (Rama)=== * Rama is writing a small blurb about the biological phase term for the GOC websit ...3 KB (487 words) - 09:51, 15 April 2019
- Dmitri, Brenley, Suzi, Paola, Susan, Rachael, Ruth, Petra, Rama, Bob '''Action:Rama''' to put on website after Rachael has sent edits ...2 KB (317 words) - 16:35, 9 April 2014
- * Does BioGRID have the same kind of scoring system like IntAct? Rama: So far I don't think so, i will look into it. ...annotations is not looking for assigned_by in protein2GO. Rachael, Petra, Rama, Kimberley will talk about it separately (since this is a protein2GO issue ...3 KB (455 words) - 16:42, 9 April 2014
- * InterPro-source advocated for InterPro2GO etc. Emily to send Rama a draft ...668 bytes (89 words) - 16:24, 9 April 2014
- *Rama: protein2go displays ECO code for evidence. Currently Marcus is the only pe *Rama: We also need a mechanism to alert curators about new ECO codes so we know ...4 KB (745 words) - 09:45, 15 April 2019
- * Almost done. Estimated time: end of this week. ACTION: Rama end email when done * ACTION: Rama will communicate with go-help people about updatings newsfeeds ...2 KB (260 words) - 16:01, 7 April 2014
- <p class="p2"><span class="s6"><a href="irc://irc.macnn.com/rama,isuser"><b>rama: </b></a></span>I tested it briefly and nothing is broken as far as I can t <p class="p6"><span class="s6"><a href="irc://irc.macnn.com/rama,isuser"><b>rama: </b></a></span><a href="http://toy.lbl.gov:9002/cgi-bin/amigo/go.cgi"><spa ...25 KB (4,873 words) - 14:48, 9 April 2014
- gwg: hi Ben, hi Rama rama: hello ...9 KB (1,683 words) - 14:48, 9 April 2014
- ** Rama: is the taxon ID for a specific strain/Ref.proteome or the generic taxon id ** Rama: while we are renaming files we should rename the GOA files too. For e.g. t ...4 KB (650 words) - 02:20, 9 August 2015
- ..."#AB5871">(08:38:09 AM) </font></font><font color="#AB5871"><font size="3">rama:</font></font><font size="3"> no worries</font><br> ..."#AB5871">(08:39:23 AM) </font></font><font color="#AB5871"><font size="3">rama:</font></font><font size="3"> we are waiting for?</font><br> ...26 KB (4,130 words) - 22:19, 8 November 2007
- Michael, Pascale, Rama, Siddartha, Chris, Seth ...802 bytes (121 words) - 13:45, 25 November 2008
- Participants: Kara, Jane, Rama, Chris, Suzi, Mike, Pascale Agenda: Rama ...2 KB (323 words) - 15:21, 27 June 2014
- * SGD: Rama, Julie # HTP: Rama Balakrishnan (Wiki page: [[2010_GO_camp_Annotation_of_HTP_data]]) ...2 KB (289 words) - 11:20, 16 January 2018
- * Rama: remove publications guidelines from main GO website * Rama: add publication guidelines in the wiki (with a disclaimer that this is int ...3 KB (414 words) - 17:16, 15 July 2015
- **Rama: EBI SRS ...680 bytes (99 words) - 18:44, 8 April 2014
- ...al;'><font size="2">(08:30:45 AM) </font></span><b><font size="3">rama [<i>rama@cider.Stanford.EDU</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>hello</font><br> ...37 KB (5,630 words) - 18:06, 16 July 2014
- Present: Rama, Li, Moni, Suzi, Huaiyu, Karen * Rama said that it was OK for users to add the link to the page. ...2 KB (348 words) - 12:03, 8 April 2014
- - Association file Readme updates (Rama)- oops, i was thinking of a SOP document that we put together some time bac *Rama- High-throughput working group ...2 KB (308 words) - 16:11, 9 April 2014
- * Rama: Document cron job for trees * Rama: Everyone needs to communicate to the software team to upload the MF-BP inf ...3 KB (461 words) - 11:14, 16 January 2018
- Rama about these and we have both spot-checked quite a few of the in column 16. Rama and I feel that these mistakes could be corrected ...3 KB (534 words) - 15:19, 27 June 2014
- 1669585 Rama, Rob, Val 1237306 Rama, Rob, Val, Simon ...3 KB (447 words) - 07:06, 2 April 2009
- Seth, Ben, Rama ...552 bytes (70 words) - 21:06, 18 March 2008
- ...Ontology by Computer [[Evidence for Inferences based on Ontology links]] (Rama) SGD: Rama, Jodi<br> ...4 KB (651 words) - 16:33, 9 April 2014
- #Develop proposal for annotation process (Suzi, Harold, Rama, Emily, Kimberly, Paul) #**Prioritization, e.g. biological domain focus (Suzi, Emily, Rama) ...3 KB (484 words) - 16:13, 1 July 2014
- * SGD: Rama Rama, Li, Dmitry, and maybe others will start doing tree annotations. In Decembe ...2 KB (389 words) - 11:15, 16 January 2018
- Present: Rama, Birgit, Sandra, JudyB, Harold, Kimberly, Chris, Ruth, Pascale * Rama: Considering that you guys and protein2GO are neighbors, why aren't you usi ...6 KB (1,022 words) - 03:26, 13 September 2023
- Participants: Rama, Donghui, Paul T, Moni, Judy, Kimberley, Suzi, Huaiyu, Pascale, Karen, Chri *Rama and Judy - More useful and efficient to have everyone together in the same ...4 KB (702 words) - 18:53, 23 May 2014
- Present: Suzi, Judy(for 10 min), PaulT, Huaiyu, Rama, Pascale, Jane, Kimberley, Rachael, David, Chris * MoonProt DB: Rama gave an overview of GO/how to make annotations to the MoonProt group over w ...2 KB (392 words) - 15:09, 27 June 2014
- Present: Kimberly, Rama, Huaiyu, Rachael, Jane, Paul T. **Group from NTNU (Norway) in collaboration with Rama, Karen, Rachael, Judy et al. have submitted a paper on transcription factor ...2 KB (358 words) - 12:15, 27 June 2014
- 1702910 Tanya, David, Rama 1881546 Eurie, Rama ...3 KB (382 words) - 07:08, 2 April 2009
- ...t from etc. I will work on interlinking and beautifying these pages later.(Rama) ...1 KB (170 words) - 14:41, 27 June 2014
- * SGD: Rama, Julie # HTP: Rama Balakrishnan (Wiki page: [[2010_GO_camp_Annotation_of_HTP_data]]) ...2 KB (353 words) - 11:19, 16 January 2018
- | Rama '''Chair: Rama Balakrishnan''' ...5 KB (774 words) - 08:17, 22 February 2023
- <font size="2">(08:36:46 AM) </font><b><font size="3">rama [<i>rama@c-24-7-123-136.hsd1.ca.comcast.net</i>] entered the room.</font></b><br> ..."#AB5871">(08:36:57 AM) </font></font><font color="#AB5871"><font size="3">rama:</font></font><font size="3"> Hi, sorry I am late</font><br> ...38 KB (5,929 words) - 14:57, 24 January 2008
- Present: David, Judy, Suzi, Rama, Pascale, Emily '''ACTION:''' Rama to add this to the AmiGO working group agenda to discuss further. ...3 KB (457 words) - 15:46, 27 June 2014
- rama: Aren't we doing what Princeton does? Provide all GA files in a pull down? rama: I think Matts request should be an enhancement- shd add to SF ...10 KB (1,833 words) - 14:50, 9 April 2014
- Pascale, Ben, Chris, Amelia, Rama, Seth ...854 bytes (126 words) - 15:31, 24 November 2008
- * Rama, Dianna (SGD)<br> ...909 bytes (138 words) - 16:35, 9 April 2014
- 981451 David, Michelle, Rama 2034849 Rama, John Garavelli ...3 KB (421 words) - 07:11, 2 April 2009
- ...ing group on evidence codes: proof of principle for chain of evidence: WG: Rama (will follow up), Paul, Alex, Suzi, Peter D? other curators? (including Le * We had a phone call yesterday (Pascale, Kara, Mike L, Paul, Mike C, Rama) ; see notes [[21_SEPT_2010_RefGen_Priorities_Discussion]] ...4 KB (574 words) - 15:28, 27 June 2014
- ** Rama mentioned that she and PaulT worked on a model for the March annotation con ...756 bytes (135 words) - 15:14, 17 August 2015
- Ben, Rama, Jane, Val, Eurie, Seth, Amelia ...956 bytes (140 words) - 13:35, 18 May 2010
- *We used to use Bluejeans, administered by Rama ==Replacing Rama== ...5 KB (817 words) - 12:00, 21 October 2015
- 1729553 Rama 1778552 Val, Rama, Karen C ...3 KB (366 words) - 07:10, 2 April 2009
- * Rama: ''Its difficult to find time.'' * Rama: Suzi has been talking to JGI, they use the InterPro2GO mapping but don't c ...6 KB (1,047 words) - 17:24, 9 April 2014
- * How often is the PAINT directory (filtered) updated in SVN? Rama will check into this. ...903 bytes (144 words) - 16:44, 9 April 2014
- Ben, Seth, Amelia, Rama, Chris ...708 bytes (100 words) - 13:24, 7 May 2008
- Present- Rama, JenC, Evelyn, Fiona, Pascale, Michelle<br> Rama: What is the format of this meeting? What is the role of GO?<br> ...3 KB (616 words) - 17:25, 9 April 2014
- Participants: Rama, Karen, Suzi, Huaiyu, Moni, Chris, Pascale *Both Karen and Rama said they liked the current trees with regard to the number of genomes. ...2 KB (432 words) - 19:08, 11 December 2014
- Attending: Jen, Evelyn, Rama, Michelle, Fiona, Pascale. Rama: Uses email as a daily prioritization. ...5 KB (906 words) - 17:26, 9 April 2014
- Seth, Amelia, Rama, Ben, Mary ...606 bytes (82 words) - 21:54, 5 December 2007
- *Should we send people to PAG again this year? If so, then shall we ask Rama again, as she has been doing it for the last few years and has done well. F ...he is happy to take the lead if David helps. She is also going to write to Rama to ask if she will be there this year. ...2 KB (400 words) - 12:30, 30 June 2014
- Seth Mary Amelia Chris Ben Rama ...792 bytes (107 words) - 13:50, 4 March 2008
- ...</span>@<span class="place">genome.stanford.edu</span> (<span class="name">Rama Balakrishnan</span>)</span> (SGD) ...</span>@<span class="place">genome.stanford.edu</span> (<span class="name">Rama Balakrishnan</span>)</span> (SGD) ...13 KB (1,980 words) - 19:22, 6 March 2020
- ==GAF2.1 (addition of pipe/comma to With/From column) (Rama)== * Rama: there are some outside users who have tickets in SF. How do we handle thos ...5 KB (807 words) - 17:15, 15 July 2015
- <font size="2">(08:32:35 AM) </font><b><font size="3">rama [<i>rama@c-24-7-118-198.hsd1.ca.comcast.net</i>] entered the room.</font></b><br> ..."#AB5871">(08:33:31 AM) </font></font><font color="#AB5871"><font size="3">rama:</font></font><font size="3"> hello</font><br> ...36 KB (5,658 words) - 18:05, 16 July 2014
- rama has joined the channel rama: gwg- please translate ...12 KB (2,201 words) - 18:46, 8 April 2014
- Chris, Jane, Amelia, Ben, Rama, Mary ...670 bytes (100 words) - 12:38, 3 June 2008
- Present: Midori, Val, Antonia, Emily, Susan, Yasmin, Rama, Yuri, Dianna, Karen, Jodi, Judy, Li, Donghui, Kimberley, Stan, Shur-Jen, V '''Action:''' Rama and Emily to draft a GO_REF and circulate it around the GO list. ...7 KB (1,147 words) - 16:29, 9 April 2014
- 2435061 Val, Rama 2435063 Val, Rama ...3 KB (403 words) - 07:11, 2 April 2009
- Present: Varsha, Becky, Pascale, Karen, Yasmin, Ruth, Li, Rama, Michele G. * Rama, Karen and Li would NOT use response to in this situation. ...3 KB (466 words) - 08:46, 16 April 2019
- *[[AmiGO help Term Search Results|Term Search Results]] : Rama ...2 KB (283 words) - 09:05, 14 December 2006
- Participants: Rama, Pascale, Marc, Paul T., Moni, Karen, Huaiyu * Rama: The reannotation actually took quite a lot of time. ...3 KB (417 words) - 09:45, 9 April 2019
- Minutes: Rama Present: Rama, Emily, Jane, MikeC, David, Judy, Suzi, Pascale<br> ...3 KB (492 words) - 13:00, 30 June 2014
- Seth, Amelia, Rama, Ben, Chris, Suzi ...730 bytes (105 words) - 13:54, 18 December 2007
- Rama emailed the editors on March 26: Discuss, decide, reply to Rama. ...3 KB (426 words) - 12:20, 2 April 2015
- Present: Rama, Huaiyu, Paul T., Kimberly, Pascale, David, Rachael, Judy Rama: Drupal site moved to Amazon cloud (lowest tier) ...4 KB (604 words) - 09:50, 15 April 2019
- GO effort organized by Rama Balakrishnan.<br> Teaching by Rama Balakrishnan, Trudy Torto-Alalibo, Fiona McCarthy, ...5 KB (743 words) - 09:16, 15 April 2019
- ...r><font color="#9440B1"><font size="2">(09:56:58 AM) </font><font size="3">rama:</font></font><font size="3"> thanks</font><br><font size="2"><font color=" ...41 KB (6,553 words) - 14:49, 9 April 2014
- * Rama - is there an option to clone a model? Chris: not at the moment. We have to * Rama- the relaionship text box expects us to start typing and will auto-suggest ...3 KB (440 words) - 17:22, 7 January 2015
- ==Paper on GAF (Rama)== ...4 KB (626 words) - 15:28, 27 June 2014
- # [Rama] Write to Chris, David, Tanya about Inter-ontology links - frequency of upd # [Rama] Organize annotation managers wiki page using what is currently in the Refe ...4 KB (625 words) - 16:24, 9 April 2014
- ...oday. Create documentation for curators and users (more succinct version) (Rama and the Evidence Code committee) ...ation in only one gene can only be IMP (protein localization IGI example) (Rama) ...4 KB (585 words) - 10:12, 15 April 2019
- Ben, Kalpana, Seth, Rama, Jane, Chris, Amelia ...1 KB (150 words) - 18:52, 21 December 2009
- 1508524 Rama 1536003 Rama, Val ...3 KB (430 words) - 07:07, 2 April 2009
- ...t from etc. I will work on interlinking and beautifying these pages later.(Rama) ...1 KB (208 words) - 15:32, 27 June 2014
- Participants: Marc, Karen, Li, Chris, Huaiyu, Rama, Paul T., Moni *: - At the last PAINT meeting, during discussion of Rama's question about use of the "Ref Genome" versus "GO Central" sources, Suzi ...4 KB (661 words) - 12:55, 7 March 2019
- Rama, Eurie, Mary, Amelia, Seth, Chris ...1 KB (167 words) - 23:22, 8 November 2007
- * rama to do a final round for this bug release [DONE] ...905 bytes (136 words) - 11:59, 1 July 2008
- Maria Costanzo, Karen Christie, and Rama Balakrishnan (SGD staff)<br> ...1 KB (185 words) - 09:13, 15 April 2019
- Seth, Sven, Pascale, Amelia, Ben, Rama, Chris ...1 KB (166 words) - 14:48, 23 March 2010
- ** Biological utility survey (Rama, Ranjana) [[File: GOCwebsiteCaltech12.pdf]] ** GOMine InterMine for GO (Mike/Rama) ([http://celis.stanford.edu:8080/gomine-dev/template.do?name=DataSouce_GOA ...6 KB (755 words) - 12:25, 8 April 2014
- ...stions about age of respondents as for are uninformative for our purposes. Rama has a script that collects authors names from publications mentioning GO an ...1 KB (184 words) - 17:16, 15 July 2015
- * NIH quarterly reports required for management groups? Rama ...re_Consortium_annotation_activities Core Consortium annotation activities] Rama, Emily ...3 KB (488 words) - 15:10, 27 June 2014
- (08:43:41 AM) sjcarbon: I guess Rama will be here soon... (08:47:25 AM) rama [rama@c-24-7-118-198.hsd1.ca.comcast.net] entered the room. ...20 KB (3,121 words) - 18:04, 16 July 2014
- ...e approx. 6000 annotations of which ~3000 are from high-throughput papers. Rama and Rachael checked many of the annotations which were of high-quality. Aft ...905 bytes (128 words) - 09:16, 15 April 2019
- Present: Rama, Rachael, David, Kimberly, Chris, Pascale, Huaiyu, Judy, Suzi ...th/From column for IMP annotations to include paper identifiers. [Rachael, Rama] ...3 KB (504 words) - 15:45, 27 June 2014
- ...that people remember these meetings and call/logon etc without reminders (Rama) ...1 KB (184 words) - 23:24, 8 November 2007
- <span style="font-weight: bold; color: blue">rama</span>: nope <span style="font-weight: bold; color: blue">rama</span>: How about searching by kingdoms? ...20 KB (3,235 words) - 13:58, 13 February 2007
- *Rama had been maintaining the help desk schedule and turned that over to Tanya w **Rama (SGD) - 4 weeks (no longer here) ...4 KB (757 words) - 13:12, 2 December 2015
- Participants: Rama, Chris, Suzi, Pascale, Paul T., Karen, Li, Huaiyu *Rama pointed out that this actually happened quite often. ...4 KB (771 words) - 15:31, 6 January 2015
- Ben, Seth, Chris, Mary, Rama ...1 KB (189 words) - 13:29, 2 December 2008
- ** AmiGO 2.1 release, looking at Drupal to cloud. Rama should check with Mike on Cloud solution. * Rama/Rachael: ...3 KB (524 words) - 19:00, 22 May 2014
- ** Search: Rama/Eurie (Eurie from email) ...1 KB (158 words) - 15:31, 28 November 2007
- 2503103 Rama 2507331 Eurie, Rama, Val ...4 KB (473 words) - 07:11, 2 April 2009
- Present: Rama, Rachael, Pascale, Jane, Chris, Huaiyu, Kimberly, Paul T. ...1 KB (193 words) - 15:37, 27 June 2014
- Participants: David, Kara, Pascale, Judy, Rama, Midori, Jane, Emily ...1 KB (200 words) - 12:45, 30 June 2014
- Present: Rama, Rachael, David Hill, Ruth, Becky, Paul, Li, Petra, Paola, Aleks, Kimberly, * Regarding running the GAF check ourselves, Rama will check with Heiko and write some documentation. This needs setting up O ...3 KB (504 words) - 09:48, 15 April 2019
- SGD: Rama, Julie, Karen, Jodi<br> ...s all set to go. Remember to make annotations to the granular annotations. Rama will add it to the GO_REF page and the Documentation page. We will also com ...5 KB (764 words) - 16:41, 9 April 2014
- ...neontology.org/GO.evidence.shtml#ikr IKR evidence code] has been updated (Rama) Karen, Jodi, Rama (SGD) ...6 KB (980 words) - 16:37, 9 April 2014
- ...al;'><font size="2">(08:35:13 AM) </font></span><b><font size="3">rama [<i>rama@c-98-207-117-165.hsd1.ca.comcast.net</i>] entered the room.</font></b><br> ...nt></span><font size="3"><span style='font-weight: normal;color: #ab5871;'>rama: </span>hi there</font><br> ...66 KB (10,007 words) - 18:05, 16 July 2014
- * 1:00-2:30: [[Annotation Advocacy and Coordination|Annotation]] Report (Rama & Rachael)- [[File: BHB2010.pdf]] *#* Annotation & reference genome groups communication (Pascale and Rama) ...5 KB (630 words) - 16:13, 7 April 2014
- * Ontology reports/email digests. Where did we get up to with this? Rama asked again this week. ...2 KB (324 words) - 11:21, 6 July 2011
- Seth, Ben, Rama ...1 KB (196 words) - 13:38, 2 March 2010
- rama has joined the channel gwg: Hi Rama! ...11 KB (2,178 words) - 14:49, 9 April 2014
- Participants: Huaiyu, Paul T., Pascale, Rama, Karen ...1 KB (213 words) - 19:08, 11 December 2014
- Hi Rama, ...1 KB (253 words) - 09:51, 15 April 2019
- Rama, Chris, Ben, Jane, Seth, Mary ...1 KB (193 words) - 12:18, 15 April 2008
- (Rama) ...An automated script tests a lot of things, when moved to Stanford servers Rama tests again then sends out email to ask for more testing. Suzi recommends t ...4 KB (769 words) - 15:37, 27 June 2014
- 1909714 Rama 1911964 Rama, Val ...3 KB (411 words) - 07:08, 2 April 2009
- Rama and Rachael took pages on SVN and put into google spreadsheet to mark which Rama: can share list/spreadsheet with everyone to get additional input ...4 KB (625 words) - 15:18, 27 June 2014
- On call: Chris, David, Heiko, Kimberly, Paul T., Rama, Seth ...1 KB (195 words) - 11:17, 19 October 2015
- * Rama SGD #Move PAINT evidence codes to official documentation (Done, Rama) ...5 KB (789 words) - 11:13, 16 January 2018
- how about rama? is she still away? <val> That leaves search for rama ...8 KB (1,372 words) - 15:32, 28 November 2007
- * Cardinality of Col-17 (Kimberley, Rama) ...1 KB (230 words) - 16:39, 9 April 2014
- '''ACTION:''' Rama to add this to the AmiGO working group agenda to discuss further. Rama and Pascale ...4 KB (625 words) - 15:32, 27 June 2014
- * '''Annotation''': Contact Rama and Emily if you can help organizing and editing the annotation pages on th Responsible: Rama and Emily will moderate, include in annotation calls ONGOING ...5 KB (797 words) - 12:33, 8 April 2014
- <span style="font-weight: bold; color: blue">rama</span>: Hi All, Welcome to our first IRC Chat <span style="font-weight: bold; color: blue">rama</span>: We are waiting for Pascale and Val ...44 KB (7,096 words) - 06:32, 3 August 2006
- ...anization of curator guidelines in the GO Consortium annotation web pages (Rama)- http://www.geneontology.org/newIndex.shtml ...2 KB (276 words) - 16:36, 9 April 2014
- Participants: Rama, Karen, Pascale, Moni, Huaiyu ...1 KB (220 words) - 17:51, 22 April 2014
- ** Rama- general guideline should be to annotate to specific term. If the authors s ** MikeC probably has this script. Rama will talk to MikeC. ...5 KB (743 words) - 16:45, 9 April 2014
- ** Anybody planning to go? (Rama) ...2 KB (244 words) - 15:28, 27 June 2014
- Mary, Seth, Amelia, Rama, Ben ...1 KB (183 words) - 12:14, 16 September 2008
- ...l for volunteers to adopt a GO annotation guidance page (contact Emily and Rama) ...2 KB (265 words) - 16:34, 9 April 2014
- - Organized full-day workshop on GO, with Harold Drabkin, Rama 1232708 - Rama Balakrishnan, Kimberly Van Auken, Val Wood ...3 KB (513 words) - 12:22, 6 May 2014
- Ben, Jane, Rama, Amelia, Mary, Seth ...1 KB (215 words) - 14:26, 2 February 2010
- David, Rachael, Paul T., Judy, Kimberly, Rama, Chris, Huaiyu, Paul S., Pascale. # CANTO deployment (Chris, Seth, Kim, Rama) ...5 KB (677 words) - 14:00, 7 May 2014
- * Email from the Transport Classification folks (Rama) Servers have been set up by Stuart and Rama is testing. ...4 KB (709 words) - 15:10, 27 June 2014
- ** Drupal Content: migration complete (Moni, Seth, Rama, ...) ** AmiGO 2.1 in testing May (Seth, Rama) ...4 KB (484 words) - 10:58, 18 June 2014
- Participants: Karen, Suzi, Judy, Paul T. Huaiyu, Rama, Moni. ...1 KB (253 words) - 19:08, 11 December 2014
- Rama and Paul have voiced concerns about processes that have some overlap with f AI: David will email Rama and Rachael to let them know about this. Each contributing annotation group ...4 KB (570 words) - 15:37, 1 July 2014
- Seth, Mary, Ben, Rama, Chris, Amelia ...1 KB (203 words) - 17:35, 8 October 2008
- (Rama, Emily, Pascale) [http://wiki.geneontology.org/index.php/Annotation_Advocac ===10:15 Community resources and Dissemination (Emily & Rama)=== ...9 KB (1,140 words) - 12:34, 8 April 2014
- 1768428 Rama, Val 1771167 Rama ...3 KB (444 words) - 07:05, 2 April 2009
- SGD: Rama, Selina, Stacia, Diane, Edith<br> ===Hardware changes (Rama)=== ...7 KB (1,151 words) - 09:48, 15 April 2019
- Request from Rama based on this paper: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3806484/ ...2 KB (242 words) - 12:32, 26 February 2015
- Present: Rama, Judy, David, Jane, Tanya, Pascale, Suzi, Moni, Chris, DavidOS, Prudence, S ...2 KB (283 words) - 09:46, 15 April 2019
- *Rachael and Rama to work on this ...2 KB (240 words) - 15:46, 27 June 2014
- 1753808 - Karen, Rama 1754690 - Val, Rama ...4 KB (507 words) - 07:05, 2 April 2009
- Amelia, Seth, Rama, Mary ...1 KB (225 words) - 13:06, 5 August 2008
- Judy, Suzi, Chris, Rama, Pascale, Kimberly, David, Paul T. *Moni is working with Rachael and Rama on documentation for submitting annotations ...3 KB (541 words) - 09:50, 15 April 2019
- <span style="font-weight: bold; color: blue">rama</span>: Sure <span style="font-weight: bold; color: blue">midori</span>: Rama wanted to "save all the 'is_a' children (and is_a grand children and is_a g ...39 KB (6,163 words) - 06:27, 13 July 2006
- There will be a demo of TAIR's resource Thursday at 10:30AM EDST. Rama and Kimberly will join the working group. ...2 KB (291 words) - 15:22, 27 June 2014
- ===Making positive annotation when there is a Not annotation (rama)=== ...6 KB (954 words) - 09:46, 15 April 2019
- * Rama SGD ...upload the MF-BP inferences on the FTP site (ADD LINK TO DOCUMENTATION). (Rama, everyone) On hold. Chris wants people to make the annotations manually on ...4 KB (591 words) - 11:14, 16 January 2018
- Participants: Pascale, Marc, Huaiyu, Karen, Paul, Suzi, Moni, Li, Rama ...2 KB (295 words) - 13:32, 8 December 2014
- Rama ...to proceed with planning. Fiona is going to have a number of meetings with Rama and Harold. Jen also will attend as required. <br> ...4 KB (691 words) - 10:10, 15 April 2019
- ** Drupal training/demo for adding content (Seth, Rama) Seth gave Rama a quick demo of the Drupal installation for the new Gene Ontology web site ...5 KB (745 words) - 07:06, 12 April 2019
- 2012346 Julie, Rama 2597089 Julie, Rama ...4 KB (470 words) - 07:11, 2 April 2009
- 2047476 Rama 2100734 Rama ...4 KB (451 words) - 07:11, 2 April 2009
- *** GAF inference and Evidence codes for automated inference (5-10 - Chris, Rama) *** GAF2 update (5-10) CJM/Rama ...4 KB (553 words) - 12:24, 30 June 2014
- Seth, Suzi, Siddartha, Pascale, Edith, Michael (Princeton), Amelia, Chris, Rama, ... ...2 KB (253 words) - 13:53, 4 November 2008
- 1592307 - Rama 1598086 - Rama ...4 KB (506 words) - 06:51, 2 April 2009
- Chair: Rama<br> *About meeting Chairs- No body in the group (other than Ben and Rama) was aware of the reverse order of Chairs for Hub and WG meetings. We decid ...4 KB (717 words) - 23:23, 8 November 2007
- ...nd managing GOhelp JIRA'''GOhelp staff, others compile gripe list, give to Rama, so we can come up with a better solution for managing emails, reports, etc # [Rama] Rama to write the announcement, waiting for more information. ...9 KB (1,396 words) - 10:09, 15 April 2019
- SGD: Rama, Diane<br> Rama: aren't we being inconsistent here? When we reannotated the Txn factors, we ...4 KB (701 words) - 16:33, 9 April 2014
- Rama Balakrishnan (SGD) Rama Balakrishnan, Rachael Huntley, Harold Drabkin, Jane Lomax, Kimberly Van Auk ...4 KB (658 words) - 05:47, 13 June 2014
- Present: Petra, Pascale, Rama, Julie, Karen, Peter, Chris, Rachael, Emily, Prudence, Yasmin, Becky, Paola Rama: are the counts outlined in the document including the automatically inferr ...5 KB (774 words) - 16:32, 9 April 2014
- ...y. It is not a lot of time, but we have run similar meetings successfully. Rama has some contacts for autophagy. Paola will let us know when we have update ...2 KB (371 words) - 17:15, 15 July 2015
- Rama Balakrishnan (SGD) and Shengqiang Shu (Berkeley) * Rama Balakrishnan (SGD) ...4 KB (651 words) - 09:58, 13 December 2018
- SGD: Rama, Stacia, Diane, Edith<br> ...roposed" on the documentation page. It should be changed to 'Implemented'. Rama will fix it. ...5 KB (804 words) - 16:32, 9 April 2014
- ...“as the author of paper citing GO, we selected you to answer this survey”. Rama will send example. ** From Rama: there are two working groups on Complexes: first one to come up with guide ...7 KB (1,187 words) - 13:57, 8 October 2015
- Participants: Fiona McCarthy, Michelle Gwinn, Jennifer Deegan, Rama Balakrishnan, Pascale Gaudet, did I miss anyone? ...2 KB (374 words) - 17:24, 9 April 2014
- Val asked me (Rama) to give a refresher on where one should post what messages/questions. The Present: Rama, Paul, Edith, Janos, Petra, Kimberley, Judy, Harol, LI, Karen, Rachael, Jan ...6 KB (1,012 words) - 16:43, 9 April 2014
- Rama SGD; *Rama asked about the proposed structure - is signal transduction in the same bra ...9 KB (1,520 words) - 18:46, 6 May 2014
- Attendance: Rama, David H., Paul T., Kimberly, Seth, Chris, Heiko ...2 KB (295 words) - 12:42, 21 September 2015
- <rama> no problem <rama> yes ...10 KB (1,749 words) - 18:05, 16 July 2014
- <span style="font-weight: bold; color: blue">rama</span>: I second that idea. <span style="font-weight: bold; color: blue">rama</span>: Karen- Is Mike going to test this today? ...13 KB (2,042 words) - 06:24, 13 July 2006
- Present: Suzi, Judy, Pascale, Rama, Rachel, David ...2 KB (302 words) - 15:20, 27 June 2014
- '''Action:''' Rama to look into retiring Stanford go-help email list: 1. 'Vacation message' wh ...2 KB (328 words) - 14:39, 27 June 2014
- ...MF-BP inferences are on the FTP site? Are there any technical questions? -Rama ...2 KB (341 words) - 16:29, 9 April 2014
- edith, michael, kimberly, seth, amelia, pascale, rama, mary ...2 KB (274 words) - 14:46, 18 November 2008
- * rama to try another icon mockup ...2 KB (258 words) - 17:31, 29 April 2010
- == Should GO be represented at JGI users meeting? Rama has volunteered. == MA: Left up to Mike and Rama. If Rama goes she should be briefed. Jane to send an email to JGI as follow up. ...6 KB (976 words) - 12:50, 30 June 2014
- Rama<br> ...2 KB (258 words) - 14:18, 30 June 2014
- * Rama and Karen had a phone conference call with Michelle and Marcus about ECO. W ...currently listed as a soft QC. They are of the kind 'resolution deferred'- Rama will fix the specs page to reflect this difference. ...10 KB (2,007 words) - 15:09, 27 June 2014
- Rama ...2 KB (249 words) - 11:19, 16 January 2018
- * PAG meeting (Organized by Rama Balakrishnan, See wiki for full details.) * For SGD Karen is now on Ontology Development and Rama is on Outreach. ...4 KB (686 words) - 12:54, 30 June 2014
- - Rachael and Rama's spreadsheet: [https://docs.google.com/spreadsheet/ccc?key=0AuvnWIcf9rbDdE ...5 KB (760 words) - 15:56, 1 July 2014
- '''Participants''': Janos, Rama, Huaiyu, Paul T, Suzi ...2 KB (343 words) - 12:56, 7 March 2019
- 1585196 - Houg, Rama 1652533 - Rama, John G ...6 KB (887 words) - 06:53, 2 April 2009
- #* Rama, David OS, Chris #* Chris, Seth, Mike, Rama ...12 KB (1,803 words) - 11:54, 20 October 2016
- |Rama |Rama ...10 KB (1,495 words) - 06:44, 17 January 2018
- Present: Rama, Rachael, Judy, Suzi, Li, Kimberly, Petra, Paola, Aleks, Jane, Susan T, bec * Rama will check with Heiko/Chris about empty GAF files. Also document how to run ...5 KB (793 words) - 09:48, 15 April 2019
- Rama presented family PTHR23100. She had 2 issues, otherwise the family was stra ...2 KB (359 words) - 19:18, 18 June 2015
- ...d contributing resources. Rama Balakrishnan (15 min) Presentation: [[File: Rama-intro-to-annotation.pdf]] *'''Chairs: Rama Balakrishnan and TBA from Swiss-Prot''' ...10 KB (1,342 words) - 08:16, 22 February 2023
- * Presentation on GOMine (Stanford group) (Rama) ...ontology.org/index.php/Annotation_Advocacy_Roadmap_2011 Roadmap] overview (Rama) ...8 KB (1,053 words) - 12:33, 8 April 2014
- Rama Balakrishnan (SGD) - thru mid-October 2015; David Hill (MGI) and Kimberly V Rama Balakrishnan worked with Trey Idekar's group (UCSD) on identifying missing ...5 KB (746 words) - 01:39, 8 December 2015
- This feature was a suggestion from a previous call and Rama made a ticket in github to make sure it is not lost. protein2GO can easily * Rama: different groups annotate differently. the goal of this exercise is to go ...12 KB (1,793 words) - 19:40, 23 June 2015
- Present: Rama, Chris, David, Jane, Kimberley, Pascale, Suzi ...2 KB (347 words) - 09:50, 15 April 2019
- |Rama Balakrishnan ...3 KB (418 words) - 10:40, 12 April 2019
- * Rama SGD ...2 KB (324 words) - 11:13, 16 January 2018
- In attendance: Chris, Fiona, Harold, Judy, Kimberly, Paul S., Petra, Rama, Sandra ...dance: Suzi, Judy, Paul S., Claire, Maria, Tony, Rachael, Chris, Kimberly, Rama, David, Harold ...6 KB (919 words) - 05:42, 16 April 2019
- GO managers: Rama Balakrishnan and Emily Dimmer, who support the work carried out by the GO C ...2 KB (301 words) - 15:49, 9 April 2014
- Rama Balakrishnan (SGD) Rama Balakrishnan, Rachael Huntley, Harold Drabkin, Jane Lomax, Kimberly Van Auk ...5 KB (808 words) - 15:46, 9 April 2014
- '''Rama:''' why would you want your work to be checked again? ====Rama's talk - transcription ontology and annotation==== ...12 KB (1,946 words) - 06:27, 12 April 2019
- * Rama will look after outreach group while Jen is away ...2 KB (302 words) - 13:01, 30 June 2014
- ** Rama has talked R. Aramayo (Professor at Texas A&M) about submitting the annotat ...2 KB (397 words) - 14:40, 27 June 2014
- Attendees:Rama, Harold, DavidOS, Paola, Rama, Heiko, DavidH, PaulT Copying from last week - we need to discuss more today, and Rama will join us: ...8 KB (1,307 words) - 12:33, 16 April 2015
- GO managers: Rama Balakrishnan and Emily Dimmer, who support the work carried out by the GO C ...2 KB (357 words) - 15:50, 9 April 2014
- #*Rama and David H would like to also, but both of them have busy schedule, so not * Ruth and Val to help Moni (+ perhaps Rama & Melanie) with composing the answer page for groups wishing to provide ann ...9 KB (1,534 words) - 16:18, 16 September 2015
- *In attendance: Judy, Suzi, Mike, Paul T., Jane, Rachael, David, Kimberly, Rama, Huaiyu **Rama would like to submit an abstract on the GPAD/GPI file format ...6 KB (952 words) - 12:15, 27 June 2014
- *Rama Balakrishnan ...2 KB (410 words) - 17:36, 9 April 2014
- ACTION: Rama set up new page for pubs ...th/From column for IMP annotations to include paper identifiers. [Rachael, Rama] ...5 KB (870 words) - 15:18, 27 June 2014
- |colspan="1" | Ruth, Rachael, Donghui, Doug, Jennifer, Rama, Kimberly, Huaiyu, Dmitry, Judy |colspan="1" | Rachael, Rama, Suzi, Moni, Val anyone else who would like to become involved ...8 KB (1,216 words) - 10:05, 15 April 2019
- Attending: Rama, Pascale, Suzi, Judy, David, Emily, PaulT<br> Minutes by Rama ...7 KB (1,124 words) - 15:29, 27 June 2014
- Present: Judy, David, Jane, Rama, Pascale, Chris and Suzi<br> ...2 KB (438 words) - 15:13, 27 June 2014
- Planning for PAG outreach (Jen, with Rama, Trudy, Michelle, Fiona 1532264 - Rama Balakrishnan, Val Wood ...5 KB (770 words) - 18:38, 14 July 2014
- ...these cellular fraction terms. We reviewed the list of TAIR annotations in Rama's spreadsheet, most of the TAIR genes that are annotated to these terms als ...8 KB (1,165 words) - 08:07, 22 June 2021
- == Rama Balakrishnan for SGD== ...7 KB (1,106 words) - 11:55, 3 March 2009
- |Rama ...3 KB (373 words) - 09:00, 12 April 2019
- ...come up with a way to represent the chaing of evidence. '''Action item''': Rama et al will form a working group on chain of evidence/LEGO and come up with ...3 KB (448 words) - 12:20, 8 April 2014
- Jane, Emily, Rama, David, Mike, Chris, Paul T and Paul S ...2 KB (431 words) - 15:13, 27 June 2014
- | Rama Balakrishnan ...3 KB (401 words) - 16:18, 31 August 2015
- ...the non-specific (and specific?) channels, and we will take it from there. Rama will distribute the list/post it on the wiki. * <font color="red">Action item</font>Rama will send out a break down of annotations to these terms (by group) and we ...7 KB (1,040 words) - 18:17, 12 May 2015
- <span style="font-weight: bold; color: blue">rama</span>: yeap, sounds good! <span style="font-weight: bold; color: blue">rama</span>: in beta20, i see the is_a icons but I don't see the part_of icons. ...32 KB (5,194 words) - 06:26, 13 July 2006
- ...://sourceforge.net/p/geneontology/ontology-requests/10258/ SF request from Rama] for a new term to annotate Rpt2, an ATPase of the regulatory particle (RP) ...3 KB (382 words) - 16:04, 15 July 2014
- Participants: Rama, Karen, Pascale, Suzi, Marc, Janos, Huaiyu Paul T. ...3 KB (450 words) - 12:57, 7 March 2019
- Rama: both running and generating scripts. Rama: email OEWG ...6 KB (1,020 words) - 15:31, 27 June 2014
- ** Action: Rama to bring this as a discussion for the Ontology and annotation groups. ...3 KB (463 words) - 11:36, 27 June 2014
- ...Some of the author names/affiliations were not accurate in this NAR paper. Rama will write to NAR to see if it can be fixed. ...3 KB (474 words) - 15:23, 27 June 2014
- SGD: Rama,Paul, Diane, Edith<br> ...3 KB (484 words) - 09:48, 15 April 2019
- Rama will report on this in GOC meeting. ...3 KB (435 words) - 15:17, 27 June 2014
- * SGD: Rama, Julie ...3 KB (393 words) - 11:20, 16 January 2018
- ** Report feedback on issues (Rama) ...3 KB (382 words) - 10:39, 12 April 2019
- 2. Rama: We have a question about the use of 'colocalizes with' qualifier. We are c 5. Rama: Ribosomal proteins ...7 KB (1,170 words) - 14:00, 12 August 2008
- * SGD: Julie, Stacia, Rama Rama: technical issues vs are we agreed that we want to create a separate GO_Ref ...13 KB (2,184 words) - 11:20, 16 January 2018
- SGD: Rama, Edith, Stacia <br> ...3 KB (468 words) - 09:47, 15 April 2019
- ** Rama- We don't want to confuse the users anymore by producing 2 GAFs. Proposal i ...3 KB (526 words) - 16:44, 9 April 2014
- * Rama ...3 KB (536 words) - 11:15, 16 January 2018
- ...tps://trello.com/c/OfHYkQCl/99-review-google-analytics-data trello]) (Seth/Rama) #* GO annotation (Rama) [[File:IntActGO.pptx]] ...10 KB (1,354 words) - 10:53, 31 August 2015
- Rama Balakrishnan, Evelyn Camon, Jennifer Clark, Harold Drabkin*, Michelle Gwinn ...3 KB (556 words) - 17:23, 9 April 2014
- From Rama Balakrishnan and Julie Park: ...3 KB (441 words) - 18:38, 15 July 2014
- Rama Balakrishnan (SGD) Rama Balakrishnan, Rachael Huntley, Harold Drabkin, Jane Lomax, Kimberly Van Auk ...7 KB (1,102 words) - 15:53, 9 April 2014
- Present: Pascale, Rama, Judy, Paul S, David, Kara, Suzi, Paul T, Emily ...3 KB (567 words) - 12:21, 27 June 2014
- In attendance: Rama, Moni, Suzi, Edith, Kimberly, Midori, Donghui, Stacia, Pascale, Rachael, Pr ***Rama - submitted a github ticket for this, but will need to follow up with Heik ...7 KB (1,181 words) - 09:47, 15 April 2019
- # Rama's request for a comment box. ...6 KB (1,061 words) - 16:00, 1 July 2014
- <span style="font-weight: bold; color: blue">rama</span>: What was it? I have the same problem. <span style="font-weight: bold; color: blue">jrichter</span>: Rama - The first thing to do is make sure that the reasoner is turned off. That' ...34 KB (5,610 words) - 06:24, 13 July 2006
- ** Rama: Should curators keep on requested GO Complexes terms? Judy, yes, we need t ...3 KB (514 words) - 15:38, 27 June 2014
- Rama, Seth, Amelia, Ben, Jane ...3 KB (502 words) - 13:36, 19 May 2009
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Maria Costanzo, Janos Demete * Marcus C. Chibucos, Christopher J. Mungall, '''Rama Balakrishnan''', Karen R. Christie, Rachael P. Huntley, Owen White1, Judith ...6 KB (887 words) - 16:58, 17 December 2014
- ...ont><font color="#3F1AB3"><font size="3">ben:</font></font><font size="3"> Rama is out</font><br> ...(08:47:07 AM) </font><font size="3">gwg:</font></font><font size="3"> only Rama replied, which was very solicitous of her...</font><br> ...46 KB (7,168 words) - 18:03, 16 July 2014
- -Rama ...3 KB (508 words) - 10:34, 9 April 2019
- ...plex? How long should the interaction last for it to be called a complex? (Rama) ## Boundary between ISS & RCA and scope of RCA evidence code (Michelle and Rama (filling in for KarenC); see [http://genetics.stanford.edu/~kchris/go/evCod ...11 KB (1,617 words) - 20:26, 8 April 2014
- ...s they should be. But it is not clear if col-16 data are also transferred. Rama will check with Chris. ...4 KB (652 words) - 17:22, 24 March 2015
- SGD: Rama, Edith, Diane * not_happens_during- there is one SGD annotation with this relationship. Rama will check into how this can be reannotated. ...7 KB (1,194 words) - 09:48, 15 April 2019
- ...neontology.org/index.php/Evidence_for_Inferences_based_on_Ontology_links) (Rama) SGD: Rama, Karen, Julie, Cindy, Jodi<br> ...8 KB (1,211 words) - 16:30, 9 April 2014
- * pasc: Rama said she can't make it ...4 KB (630 words) - 18:08, 16 July 2014
- ...ng and contrasting them. Includes gene annotation gold standard sets that Rama has been shepherding. Write our own gene enrichment tool. ...elaxed to allow Reactome IDs in the reference field? Person: Peter D’E and Rama. ...18 KB (2,847 words) - 12:41, 8 April 2014
- '''Present:''' Rama, Karen and Jodi (MGI), Stan (RGD), Li, Mary and Judy (MGI), Kimberly (WormB Rama: A number of GOC-agreed QC checks have been added to Mike's checking script ...8 KB (1,291 words) - 16:37, 9 April 2014
- Minutes: Rama, Karen ** transcription overhaul (Rama & Karen) [[Media:TxnOH-OntDev-Report.pdf]], [[Media:TxnOH-AnnotReport.pdf]] ...9 KB (1,356 words) - 10:08, 15 April 2019
- 1825979 Val, Rama ...3 KB (427 words) - 07:06, 2 April 2009
- rama has joined the channel rama: John-Boy or Girl? ...37 KB (6,547 words) - 18:08, 30 June 2014
- ** not discussed today but a very nice example from Rama - sequence is extremely conserved, annotation to AN0 can be done even thoug ...4 KB (599 words) - 11:15, 16 January 2018
- 1849534 Donghui, Rama, Karen C ...3 KB (390 words) - 07:06, 2 April 2009
- '''Participants''': Rama, Pascale, Marc, Karen, Donghui, Huaiyu, Paul T. Suzi ...5 KB (791 words) - 12:56, 7 March 2019
- Participants: Rama, Donghui, Li, Moni, Pascale, Suzi, Chris, Paul, Huaiyu ...4 KB (640 words) - 13:28, 16 December 2014
- ben: rama suggested moving the golite (amigo) db load back a day or two so that it wi ...4 KB (716 words) - 14:45, 26 January 2010
- * Chris, Harold, Doug, Rama, Kimberly, Mary, Ruth, Pascale, Jim, Doug, Fiona, Lakshmi, Val, Yasmin, Emi ''Rama:'' Perhaps GO is not the best resource to capture such detail, curators nee ...17 KB (2,781 words) - 12:50, 7 February 2023
- SGD: Rama, Diane, Paul<br> ...4 KB (622 words) - 16:30, 9 April 2014
- 2100763 Karen C, Rama, Val ...3 KB (415 words) - 07:12, 2 April 2009
- ...nclude annotation extension information. We currently have over 30,000 '''(Rama can you check this figure in the GOC database? This is from our database, s Rama Balakrishnan, Rachael Huntley, David Hill, Harold Drabkin, Jane Lomax, Kimb ...9 KB (1,429 words) - 15:53, 9 April 2014
- *In attendance: Paola, Kimberly, Judy, Paul T., Rama, David, Chris, Huaiyu, Suzi, Melanie, Moni ...4 KB (628 words) - 13:41, 19 August 2015
- Participants: Donghui, Suzi, Paul T., Moni, Karen, Chris, Rama, Mark, Pascale, Li, Huaiyu ...4 KB (713 words) - 15:56, 6 November 2014
- ====Annotation Advocacy Group Report (Rama)==== Rama went through the recent accomplishments of the annotation advocacy group. O ...29 KB (4,786 words) - 12:22, 8 April 2014
- ...web presence group in the advocacy monthly reports. She will contact Ben, Rama and Amelia to ask them to contribute information to the report. [not yet do ...3 KB (527 words) - 12:43, 30 June 2014
- ...r how cystin interacts with necdin? Is cotransfection considered IGI? Both Rama and Midori thought this was not IGI based on current definition. Ruth, Rebe ** Rama: I would like to consult other curation projects: e.g. bioGRID to see how t ...17 KB (2,851 words) - 05:52, 27 May 2015
- Chris: Rama was looking at this. ...4 KB (699 words) - 11:53, 11 August 2015
- <span style="font-weight: bold; color: blue">rama</span>: Karen is out at a meeting. I agree we should wait. <span style="font-weight: bold; color: blue">jrichter</span>: How's about... Rama or Harold? Can you do it? (If you volunteer now, you're off the hook the ne ...31 KB (4,894 words) - 06:20, 13 July 2006
- Rama Balakrishnan has sent emails to users she met at the PAG meeting inviting t ...4 KB (583 words) - 09:12, 15 April 2019
- 1969138 Rama, Julie ...3 KB (414 words) - 07:07, 2 April 2009
- * 9:30 - 11:00 '''Workshop #1''': Annotation (Rama, Pascale, David OS, Chris, Rachael, Ruth) - Room 309 ...4 KB (554 words) - 11:56, 20 October 2016
- | Rama Balakrishnan ...3 KB (476 words) - 15:28, 15 April 2015
- ...he is happy to take the lead if David helps. She is also going to write to Rama to ask if she will be there this year. ...4 KB (756 words) - 16:02, 7 April 2014
- * David, Kimberly, and Rama will review their March paper models to compare with Paul's version. ...4 KB (697 words) - 14:08, 19 May 2015
- ...sues, but no editors are involved - maybe DOS could liaise with Birgit and Rama? ...4 KB (675 words) - 15:48, 9 July 2015
- 1587325 - Emily, David, Rama ...4 KB (521 words) - 06:50, 2 April 2009
- 1589414 - Harold, Rama ...4 KB (522 words) - 06:51, 2 April 2009
- SGD: Rama, Paul, Diane<br> ...4 KB (731 words) - 09:48, 15 April 2019
- ...er, Pascale Gaudet, Rachael Huntley, Yasmin Alam-Faruque, Varsha Khodiyar, Rama Balakrishnan, Ruth Lovering, Kimberly Van Auken (minutes) ''Rama:'' Is receptor internalization a consequence of the kinase activity? ...38 KB (6,036 words) - 08:16, 22 February 2023
- ** Staff: Rama Balakrishnan, Rachael Huntley, Monica Muñoz-Torres, Harold Drabkin, Jane L ...4 KB (604 words) - 17:06, 19 December 2014
- rama has joined the channel rama has quit the server saying: Quit: rama ...22 KB (3,784 words) - 18:09, 30 June 2014
- ...and Jane and David are on it, to coordinate what we're doing. Rachael and Rama are coordinating, but we have leeway on the ontology part. So let's just do ...5 KB (833 words) - 15:42, 1 July 2014
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Karen Christie, Maria Costan ...4 KB (574 words) - 19:34, 6 March 2020
- *Rama Balakrishnan (SGD) ...4 KB (658 words) - 10:57, 8 April 2014
- Present: SGD- Rama, Karen, Julie, Jodi, Ruth, Rachael, Yasmin, Kimberly, Stan, Tim, Tom, Shur- ...y of the month). If any of you have issues with this schedule please email Rama and Rachael.<br> ...18 KB (2,920 words) - 15:42, 9 April 2014
- Participants: Donghui, Karen, Rama, Marc, Huaiyu, Moni, Li ...5 KB (657 words) - 12:56, 7 March 2019
- Rama Balakrishnan (SGD) ...5 KB (761 words) - 16:19, 19 December 2014
- SGD: Rama, Karen, Jodi<br> ...5 KB (841 words) - 16:37, 9 April 2014
- *Annotation & Curation (Rama Balakrishnan, Emily Dimmer) ...4 KB (639 words) - 12:50, 30 June 2014
- SGD: Rama, Edith, Diane ...5 KB (806 words) - 16:46, 9 April 2014
- 1695255 - Rama ...4 KB (633 words) - 06:53, 2 April 2009
- ...sues, but no editors are involved - maybe DOS could liaise with Birgit and Rama? ...5 KB (796 words) - 06:55, 5 August 2015
- ...web presence group in the advocacy monthly reports. She will contact Ben, Rama and Amelia to ask them to contribute information to the report. ...web presence group in the advocacy monthly reports. She will contact Ben, Rama and Amelia to ask them to contribute information to the report. <br> ...11 KB (1,951 words) - 12:46, 30 June 2014
- ...the Evidence Ontology (ECO)." Marcus C. Chibucos, Christopher J. Mungall, Rama Balakrishnan, Karen R. Christie, Rachael P. Huntley, Owen White, Judith A. * Together with Rama Balakrishnan from SGD, Rachael Huntley is a manager for the GO Consortium's ...10 KB (1,380 words) - 19:11, 6 March 2020
- Pascale G, Rama B: New groups might not be able to handle this. How many new groups are req Rama B: these is a draft web page ready, with the majority of text and examples ...25 KB (4,182 words) - 10:12, 15 April 2019
- 1490810 - Rama Balakrishnan ...5 KB (629 words) - 11:43, 20 August 2009
- SGD: Rama, Selina, Diane, Stacia<br> ...5 KB (800 words) - 16:30, 9 April 2014
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Maria Costanzo, Selina Dwigh ...5 KB (666 words) - 16:56, 1 July 2014
- Rama Balakrishnan*, ...4 KB (526 words) - 19:34, 6 March 2020
- RAMA notes that those not using protein2go may not be getting warnings about inc AI: Rama to check with Tony about who is getting reports of failure to load into Qui ...25 KB (3,988 words) - 17:59, 29 July 2015
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Karen Christie, Maria Costan ...4 KB (612 words) - 19:34, 6 March 2020
- ...web presence group in the advocacy monthly reports. She will contact Ben, Rama and Amelia to ask them to contribute information to the report. [not yet do ...5 KB (738 words) - 13:01, 30 June 2014
- ACTION: Eurie will talk to Rama ...4 KB (716 words) - 12:48, 30 June 2014
- Present: Ruth Lovering (Chair), Rama, Jodi, Jim Hu, Li, Becky Rama: tool being developed to create these reciprocal annotations. This was a so ...37 KB (5,731 words) - 08:15, 22 February 2023
- * SGD: Rama ...6 KB (874 words) - 11:19, 16 January 2018
- | Rama Balakrishnan | rama@genome.stanford.edu* ...12 KB (1,878 words) - 11:51, 12 April 2019
- ...web presence group in the advocacy monthly reports. She will contact Ben, Rama and Amelia to ask them to contribute information to the report. Amelia is s ...5 KB (915 words) - 12:37, 30 June 2014
- the transport interest group, Maria, Rama, and David for further comments? ...ussed the specific case of ?chaperone activity?, which has been obsoleted. Rama explained that the word ?chaperone? is used to mean three separate activiti ...15 KB (2,404 words) - 10:22, 16 December 2008
- Rama Balakrishnan, Gail Binkley, Karen Christie, Maria Costanzo, Selina Dwight, ...5 KB (696 words) - 11:57, 20 August 2009
- Rama Balakrishnan ...6 KB (892 words) - 11:52, 12 April 2019
- rama has joined the channel jenclark: rama is your microphone muted? ...96 KB (16,723 words) - 18:08, 30 June 2014
- Rama Balakrishnan, Gail Binkley, Karen Christie, Maria Costanzo, Selina Dwight, ...5 KB (703 words) - 11:56, 20 August 2009
- '''Participants''': Marc, Pascale, Paul, Karen, Moni, Chris, Rama, Janos, Li, and Huaiyu (left early), ...7 KB (1,129 words) - 12:56, 7 March 2019
- Rama Balakrishnan, ...5 KB (752 words) - 12:15, 10 February 2023
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Maria Costanzo, Selina Dwigh ...5 KB (771 words) - 19:34, 6 March 2020
- ** Heiko is going to implement the checks in Jenkins. Rama will get a list of these checks from Tony and pass them along. ...10 KB (1,284 words) - 14:41, 22 September 2015
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Maria Costanzo, Selina Dwigh ...5 KB (795 words) - 16:56, 1 July 2014
- #* Rama: perhaps at end of year, we could take a break to focus on annotation and e ===Annotation 1: Binding (Rama, Emily) === ...49 KB (7,813 words) - 12:29, 8 April 2014
- SGD: Rama, Diane, Edith <br> ...7 KB (1,104 words) - 09:46, 15 April 2019
- Get Kimberly and Rama on board, LEGO call? ...6 KB (975 words) - 13:58, 13 January 2015
- * Rama: It doesn't make sense to make a Process annotation with IPI. Just because ...8 KB (1,301 words) - 03:28, 13 September 2023
- ...e GOA database. The annotations were reviewed by Rachael Huntley (GOA) and Rama Balakrishnan (SGD) and were deemed to be of high-quality. Almost 5800 annot ...9 KB (1,278 words) - 15:47, 9 April 2014
- |Rama Balakrishnan ...7 KB (1,010 words) - 11:53, 12 April 2019
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Karen Christie, Maria Costan ...6 KB (838 words) - 13:23, 4 November 2011
- |Rama Balakrishnan ...7 KB (1,257 words) - 11:53, 12 April 2019
- - David H’s plan (approved): we explain this on an annotation call; (update: Rama suggested April) we can suggest to look specifically at TRP channels, but o ...8 KB (1,246 words) - 06:53, 11 May 2015
- outreach. Karen, Eurie, and Rama were the main organisers.<br> ...7 KB (1,287 words) - 09:15, 15 April 2019
- SGD: Rama and Karen ...8 KB (1,243 words) - 16:27, 9 April 2014
- Rama: How to represent PS in this case? check if there are recent papers explain Rama: A NOT qualifier will change the meaning of hte annotation. If you annotate ...22 KB (3,482 words) - 06:05, 27 August 2015
- * Rama and Eurie on SGD's practice- ...7 KB (1,011 words) - 08:14, 22 February 2023
- * drafts of new annotation pages are being (slowly) developed by Rama and Emily [http://wiki.geneontology.org/index.php/Mock-ups_of_new_GOC_Annot ...7 KB (965 words) - 06:08, 12 April 2019
- |Rama Balakrishnan ...7 KB (1,136 words) - 11:51, 12 April 2019
- ...general they are) after he's done with apoptosis re-curation; he'll email Rama about it. Chris might then look into automating at least part of the proces ...8 KB (1,210 words) - 15:50, 1 July 2014
- Rama reminded us that we should reply to this user [now done]: ...8 KB (1,247 words) - 16:24, 10 March 2015
- # (Rama:) Interpretation of author statements: Authors very often use the word comp Peter, Judy, Suzi, Rama, Pascale, Emily, Harold, Diana, Serenella, Cecilia, Chris. ...30 KB (4,802 words) - 08:14, 22 February 2023
- * Rama mentioned international meeting on rice genomics; see http://www.isrfg2007. ...6 KB (1,022 words) - 12:42, 30 June 2014
- ** AI: Karen will check with Rama about whether the AmiGO hub meetings are still active, then we can make a d ...8 KB (1,280 words) - 17:46, 30 June 2014
- ...e GOA database. The annotations were reviewed by Rachael Huntley (GOA) and Rama Balakrishnan (SGD) and were deemed to be of high-quality. Almost 5800 annot ...9 KB (1,422 words) - 15:52, 9 April 2014
- * Rama Balakrishnan Stanford University (arriving on 12th at 735PM by United) ...6 KB (799 words) - 09:11, 13 October 2014
- ** Rama: what would the user see? ** Tanya: To answer Rama and Ranjana: people need to use information from the graph anyway ...29 KB (4,509 words) - 10:06, 15 April 2019
- ...base. The annotations were reviewed by Rachael Huntley (UniProtKB-GOA) and Rama Balakrishnan (SGD) and were deemed to be of high-quality. The annotations w * Together with Rama Balakrishnan from SGD, Emily Dimmer is a manager for the GO Consortium's An ...19 KB (2,882 words) - 12:15, 10 February 2023
- |Rama Balakrishnan ...9 KB (1,291 words) - 10:06, 15 April 2019
- ** Rama: one option is to post a message on the go-consortium list about the relati ...9 KB (1,438 words) - 18:51, 27 August 2015
- ...to Mike Livstone, 4 other curators have been trained to do PAINT curation: Rama Balakrishnan, Varsha Khodiyar, and (Nov 19) Li Ni and Dmitry Sitnikov ...10 KB (1,317 words) - 10:39, 16 January 2018
- I'm not sure my stand it, likely Rama, will get involved with testing, but since SGD is the production environmen OK, sounds good John, but I think Rama will be able to sit in for at least the business part to keep in touch with ...27 KB (3,902 words) - 10:30, 1 July 2014
- | Rama Balakrishnan ...8 KB (1,148 words) - 11:52, 12 April 2019
- Rama: perhaps at end of year, we could take a break to focus on annotation and e ===Annotation 1: Binding (Rama, Emily) === ...54 KB (8,575 words) - 11:51, 12 April 2019
- ...: '''Kimberly''' offered example about a group wants to annotate lncRNAs - Rama started working with them. They have protein-to-GO accounts. '''Moni''': Tr ...10 KB (1,701 words) - 09:59, 9 April 2019
- * Judith Blake and Karen Christie are working with Rama Balakrishnan to coordinate with Astrid Laegrid of the Norwegian University ...35 KB (3,935 words) - 15:46, 4 June 2014
- Present: Rama, Julie, Jodi, Karen, Rob Nash, Dianna (SGD)<br> ...12 KB (1,864 words) - 06:56, 12 April 2019
- |Rama Balakrishnan ...10 KB (1,551 words) - 11:53, 12 April 2019
- ...r how cystin interacts with necdin? Is cotransfection considered IGI? Both Rama and Midori thought this was not IGI based on current definition. Ruth, Rebe ...16 KB (2,263 words) - 12:32, 21 August 2015
- ...t "ATP hydrolysis" is an exact synonym. Pascale has sent this question to Rama and Emily. ...11 KB (1,795 words) - 09:53, 15 April 2019
- #Rama Balakrishnan, Ph.D., Senior Scientific Curator, Saccharomyces Genome Databa ...12 KB (1,521 words) - 09:06, 12 April 2019
- Rama Balakrishnan, Gail Binkley, J. Michael Cherry, Maria Costanzo, Selina Dwigh ...11 KB (1,417 words) - 18:49, 10 December 2014
- | Rama Balakrishnan ...9 KB (1,300 words) - 08:16, 22 February 2023
- ...entation – abbreviated version on web pages and more detailed on GOC Wiki (Rama) 13. Sue, Michelle, Rama put evidence code proposal in the context of what we discussed today ...31 KB (4,938 words) - 10:06, 15 April 2019
- |Rama Balakrishnan ...11 KB (1,838 words) - 11:52, 12 April 2019
- ...elt they couldn't keep up. Now, none of us edit at all. After the webinar, Rama and I now feel almost up to speed ...25 KB (4,125 words) - 06:30, 13 July 2006
- * Rama Balakrishnan ...12 KB (1,905 words) - 09:53, 15 April 2019
- :Rama has suggested two - one at JGI, and the next rice meeting in Japan ...12 KB (1,933 words) - 12:31, 30 June 2014
- Rama Balakrishnan ...13 KB (2,084 words) - 11:55, 12 April 2019
- ...u find you need to use this for MF, bring up your example with Rachael and Rama, or request a new GO term. ...18 KB (2,857 words) - 13:11, 10 October 2014
- * Together with Rama Balakrishnan from SGD, Rachael Huntley is a manager for the GO Consortium's ...14 KB (1,963 words) - 09:50, 13 October 2014
- There hasn't been any discussion of the papers Rama suggested for the RCA discussion, but if you read them you'll notice that t ...17 KB (3,069 words) - 05:51, 16 April 2019
- Rama ...14 KB (2,196 words) - 11:53, 12 April 2019
- Pascale, Kara, Mike L, Paul T, Rama ...16 KB (2,373 words) - 11:18, 16 January 2018
- * Together with Rama Balakrishnan from SGD, Rachael Huntley is a manager for the GO Consortium's ...17 KB (2,438 words) - 05:32, 16 April 2019
- * Together with Rama Balakrishnan from SGD, Rachael Huntley is a manager for the GO Consortium's ...17 KB (2,386 words) - 05:33, 16 April 2019
- ...d in a discussion between Alan Bridge, Pascale Gaudet, Rachael Huntley and Rama Balakrishnan during 2012. ...22 KB (3,619 words) - 08:15, 27 September 2021
- Rama<br> ...25 KB (3,637 words) - 18:48, 23 April 2014
- | Rama ...31 KB (5,010 words) - 08:15, 22 February 2023
- '''2001''' Rama SGD, Michelle TIGR, Harold Drabkin MGI ...32 KB (5,124 words) - 10:12, 15 April 2019
- '''2001''' Rama Balakrishnan SGD, Michelle Gwinn Giglio TIGR, Harold Drabkin MGI ...36 KB (5,808 words) - 10:12, 15 April 2019
- *(Rama)We need an annotation camp. It’s been several years. ...41 KB (6,404 words) - 10:13, 15 April 2019
- Ruth Lovering, Rama Balakrishnan, Tanya Berardini, Judith Blake, Karen Christie, Harold Drabkin ...83 KB (12,418 words) - 12:54, 16 November 2023