TAIR Progress Report for October 2008: Difference between revisions
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(New page: == TAIR, The Arabidopsis Information Resource, October, 2008 == === Staff working on GOC tasks === Tanya Berardini, Donghui Li The total number of FTE working on GOC tasks is 1.5???. =...) |
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'''TAIR-Plant Physiology collaboration''' | '''TAIR-Plant Physiology collaboration''' | ||
'''Contribution to PAMGO''' | |||
Donghui Li has participated in the development of PAMGO, particularly the discussion involving programmed cell death. He is the co-author of a manuscript: Manipulation of programmed cell death during host-symbiont associations, Marcus C Chibucos1, Candace W Collmer, Trudy Torto-Alalibo, Michelle Gwinn-Giglio, Magdalen Lindeberg, Donghui Li, Brett M Tyler1. | |||
'''Annotation Outreach and User Advocacy Efforts''' | '''Annotation Outreach and User Advocacy Efforts''' | ||
* ASPB (American Society of Plant Biologists) Plant Biology Meeting, June 29 2008, Merida Mexico | * ASPB (American Society of Plant Biologists) Plant Biology Meeting, June 29 2008, Merida Mexico | ||
* 19th International Conference on Arabidopsis Research, July 23 2008, Montreal Canada | * 19th International Conference on Arabidopsis Research, July 23 2008, Montreal Canada | ||
'''Publications''' | |||
Revision as of 10:00, 22 October 2008
TAIR, The Arabidopsis Information Resource, October, 2008
Staff working on GOC tasks
Tanya Berardini, Donghui Li
The total number of FTE working on GOC tasks is 1.5???.
Annotation Progress
Since April 2008, the following annotations have been added to TAIR
| GO aspect | Number of annotations added | Number of genes update | Number of publications used |
|---|---|---|---|
| Biological Process | xxxx | xxx | xxx |
| Molecular Function | xxxx | xxx | xxx |
| Cellular Component | xxxx | xxx | xxx |
The following table shows our progress in completing the genes selected for the Reference Genome projects
| Month | Number of Targets | Number of Arabidopsis genes | Number of genes completed | Proportion |
|---|---|---|---|---|
| May | xx | xx | xx | xx% |
| June | xx | xx | xx | xx% |
| July | xx | xx | xx | xx% |
| August | xx | xx | xx | xx% |
| September | xx | xx | xx | xx% |
| October | xx | xx | xx | xx% |
| Total | xx | xx | xx | xx% |
Methods and strategies for annotation
Other Highlights
Ontology Development Contributions
| New Term Requests submitted by TAIR | xx |
| Ontology changes submitted by TAIR | xx |
TAIR-Plant Physiology collaboration
Contribution to PAMGO Donghui Li has participated in the development of PAMGO, particularly the discussion involving programmed cell death. He is the co-author of a manuscript: Manipulation of programmed cell death during host-symbiont associations, Marcus C Chibucos1, Candace W Collmer, Trudy Torto-Alalibo, Michelle Gwinn-Giglio, Magdalen Lindeberg, Donghui Li, Brett M Tyler1.
Annotation Outreach and User Advocacy Efforts
- ASPB (American Society of Plant Biologists) Plant Biology Meeting, June 29 2008, Merida Mexico
- 19th International Conference on Arabidopsis Research, July 23 2008, Montreal Canada
Publications