Talk:PAMGO 2007 RESOLVED ISSUES: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
== The other organism string ==
== The other organism string ==


There was a consensus to replace the phrases "by organism" and  "other organism" with the specific words "symbiont" and "host" where appropraite. Another excellent point raised had to do with the fact that, not all users will immediately know that the word symbiont is used by PAMGO to refer to mutualist, pathogens and commensalists. Suggesttion was to use those three words in the term and include as narrow synonyms.
There was a consensus to replace the phrases "by organism" and  "other organism" with the specific words "symbiont" and "host" where appropriate. Another excellent point raised had to do with the fact that, not all users will immediately know that the word symbiont is used by PAMGO to refer to mutualist, pathogens and commensalists. Suggesttion was to use those three words in the term and include as narrow synonyms.
Also indicate in the comment field that this is used when annotating genes from pathogens, mutualists or commensalists
Also indicate in the comment field that this is used when annotating genes from pathogens, mutualists or commensalists


Line 9: Line 9:


'''Action Item 2'''
'''Action Item 2'''
          "acquisition of nutrients by pathogen..................."
          "acquisition of nutrients by mutualist..................."
          "acquisition of nutrients by commensal..................."

Revision as of 20:43, 4 July 2007

The other organism string

There was a consensus to replace the phrases "by organism" and "other organism" with the specific words "symbiont" and "host" where appropriate. Another excellent point raised had to do with the fact that, not all users will immediately know that the word symbiont is used by PAMGO to refer to mutualist, pathogens and commensalists. Suggesttion was to use those three words in the term and include as narrow synonyms. Also indicate in the comment field that this is used when annotating genes from pathogens, mutualists or commensalists


Action Item 1 Most of these changes have been made by Jane already. If you come across any that still needs modification, please add to the list below....preferably GO ID and term.

Action Item 2

         "acquisition of nutrients by pathogen..................."
         "acquisition of nutrients by mutualist..................."
         "acquisition of nutrients by commensal..................."