Tasks/Priorities 2012 (Archived): Difference between revisions
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## Chemical entity templates | ## Chemical entity templates | ||
## Process-cell component templates | ## Process-cell component templates | ||
# LEGO prototype environment | |||
# formal specification of expressive annotations in OWL |
Revision as of 15:05, 7 March 2012
- Implementation of the JIRA project management software for the GO Consortium
- Common Annotation Framework. Determine the directions and deliverables for the next year.
- Full documentation of the minimal/ideal annotation format, including the gp2protein, gp2rna formats. (are the PIs/managers happy for the current draft circulated on the email list to be published on the wiki?)
We need to be able to start relying on other GO-NIH funded curators for contributions. Perhaps also set up some focused working group meetings to make headway.
- Clean up existing documentation on wiki and move to the GO website.
- Create new documentation for existing file formats: annotation/mapping files, annotation guidance (already mentioned, and set as a prioritised task for this next quarter)
- Annotation documentation guidance; what constitutes a redundant annotation, clarification of contributes_to qualifier. Specific guidance for transcription and apoptosis.
- Discuss and resolve new annotation methods: annotating to protein complexes, mapping of ECO to GO ev. codes, annotation relations
- define pipeline for PAINT curation and GOC annotation targets - to be coordinated with PAINT folks
- Evidence codes. Mapping of ECO to GO evidence codes. Resolve evidence code for MF-BP, BP-CC inferences
- QC checks, integrating centrally created annotations (reciprocals/inferrred). We need to collaborate with the software group as to how to implement for best impact.
- open up CANTO in some form to the public, communication with emerging annotation groups
- Transition_to_OWL
- TermGenie templates
- Regulation by
- Chemical entity templates
- Process-cell component templates
- LEGO prototype environment
- formal specification of expressive annotations in OWL