Transition to OWL 2010-2012: Difference between revisions
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=== OWLAPI Bridge === | === OWLAPI Bridge === | ||
Create a bridge layer between the OBO Parser and the OWLAPIv3 model. | |||
Users can use the OBO Parser in its own right or seamlessly within the OWLAPI | |||
=== Integration === | === Integration === |
Revision as of 20:34, 9 August 2010
Project lead: Chris Mungall
Deliverables
obof1.4 guide
http://www.geneontology.org/GO.format.obo-1_4.shtml
Status: draft
obof1.4 syntax
Formal specification of syntax
status: in progress - see obo format section of obolog guide on:
http://www.geneontology.org/GO.format.obo-1_3.shtml
OWL2 Mapping
status: in progress
Java OBO Parser
We need a ground-up rewrite of the OBO parser according to the spec. This will be a direct translation to OBO abstract syntax. This will form the basis of a future P4 parser
JUnit Test Suite
There must be a parser test suite covering all obo format tags
OWLAPI Bridge
Create a bridge layer between the OBO Parser and the OWLAPIv3 model.
Users can use the OBO Parser in its own right or seamlessly within the OWLAPI