Transition to OWL 2010-2012
Project lead: Chris Mungall
Deliverables
obof1.4 guide
http://www.geneontology.org/GO.format.obo-1_4.shtml
Status: draft
obof1.4 syntax
Formal specification of syntax
status: in progress - see obo format section of obolog guide on:
http://www.geneontology.org/GO.format.obo-1_3.shtml
OWL2 Mapping
status: in progress
Java OBO Parser
We need a ground-up rewrite of the OBO parser according to the spec. This will be a direct translation to OBO abstract syntax. This will form the basis of a future P4 parser
JUnit Test Suite
There must be a parser test suite covering all obo format tags
OWLAPI Bridge
Create a bridge layer between the OBO Parser and the OWLAPIv3 model.
Users can use the OBO Parser in its own right or seamlessly within the OWLAPI