Uberon: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
Line 28: Line 28:
Combination of Uberon, MA and EMAP plus bridging axioms:
Combination of Uberon, MA and EMAP plus bridging axioms:


* http://purl.obolibrary.org/obo/uberon/bridge/collected-mouse-with-stages.obo
* http://purl.obolibrary.org/obo/uberon/bridge/collected-mouse-with-stages.owl


== References ==
== References ==

Revision as of 22:13, 25 January 2013

Uberon is a multi-species anatomy ontology covering metazoans (animals). It's structure is well-aligned with the development hierarchy in GO.

Uses in GO

There are two primary uses of Uberon in GO:

Connections with other AOs

Mouse

MGI c16 annotations include use of MA and EMAP.

EMAP:

Note that EMAP is staged - each term represents a specific structure at a specific stage. This information is retained in the axioms linking back to Uberon

MA:

Combination of Uberon, MA and EMAP plus bridging axioms:

References

Mungall, C. J., Torniai, C., Gkoutos, G. V., Lewis, S. E., and Haendel, M. A. (2012) Uberon, an integrative multi-species anatomy ontology Genome Biology 13, R5. http://genomebiology.com/2012/13/1/R5

See Also