XP:biological process xp cellular component: Difference between revisions
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* http://sourceforge.net/tracker/index.php?func=detail&aid=1939817&group_id=36855&atid=440764 | * http://sourceforge.net/tracker/index.php?func=detail&aid=1939817&group_id=36855&atid=440764 | ||
* http://sourceforge.net/tracker/index.php?func=detail&aid=2015221&group_id=36855&atid=440764 | * http://sourceforge.net/tracker/index.php?func=detail&aid=2015221&group_id=36855&atid=440764 -- made after it was clarified CCs are anatomical structures | ||
* http://sourceforge.net/tracker/index.php?func=detail&aid=2016121&group_id=36855&atid=440764 | * http://sourceforge.net/tracker/index.php?func=detail&aid=2016121&group_id=36855&atid=440764 | ||
Revision as of 11:11, 11 July 2008
XPs defining biological processes in terms of cellular components; example:
[Term] id: GO:0000054 ! ribosome export from nucleus intersection_of: GO:0051168 {namespace=biological_process_xp_cellular_component} ! nuclear export intersection_of: OBO_REL:results_in_transport_of GO:0005840 {namespace=biological_process_xp_cellular_component} ! ribosome
i.e. ribosome export from nucleus = nuclear export THAT results_in_transport_of ribosome
(Experimenting with the use of namespace tags as an easy way to separate out xp content from main GO)
See the go/scratch/xps directory
- xp obo file
- imports file - point oboedit at this
This xp file has been registered in the OBO xps metadata so it is available here:
Missing Link Reports:
- http://sourceforge.net/tracker/index.php?func=detail&aid=1939817&group_id=36855&atid=440764
- http://sourceforge.net/tracker/index.php?func=detail&aid=2015221&group_id=36855&atid=440764 -- made after it was clarified CCs are anatomical structures
- http://sourceforge.net/tracker/index.php?func=detail&aid=2016121&group_id=36855&atid=440764