2017-11-08

Agenda

Ontology

• Managing tickets, training, editors' calls for November
• Reviewing minimal information for new term requests
  • https://github.com/geneontology/go-ontology/blob/master/CONTRIBUTING.md

Annotation

• transport do not annotate
  • improving specificity by banning high level terms
• HTP data
  • Review HTP annotations
• signaling workshop follow-up
• Biological Process Relations
  • involved in
  • acts upstream of
  • acts upstream of or within
  • Do we want the positive and negative effect children of the acts upstream of terms?
  • Q: do we want the positive and negative effects of the above?
• Molecular Function Relations
  • enables
  • contributes to
• Cellular Component Relations
  • part of // is found in ? /localizes in
  • functions in
  • colocalizes with (organelles vs complexes???)
• Noctua/GO-CAM
  • groups in users.yaml
• Displaying Annotations
  • http://wiki.geneontology.org/index.php/GO_annotation_fields_required_for_correct_display
  • First step- Go to the different MODS and AMIGO2 and see how they conform to these guidelines.

Pascale

1) close https://github.com/geneontology/noctua/issues/330?

3) Noctua

4) https://github.com/geneontology/helpdesk/issues/70

5) https://github.com/geneontology/noctua/issues/516

6) Birgit

7) transport? for annot call