2017 November Berkeley GO Developers Meeting
Agenda (Draft)
Logistics
Agenda
zoom links will be added for open sessions
mon
Seth/Tremayne
am
rm 258 (Seth)
- 10.30am Tremayne welcome
- 11.00am bbop group meeting
- 11.30am lunch
pm
rm 257
- 1-1.30pm OPEN SESSION Noctua and GOCAMs (Chris)
- 1.30-2pm OPEN SESSION The noctua workbench system (Seth)
- 2-5pm: Noctua workbench hacking (Seth/Tremayne/Eric)
tue
am
rm 258 (Seth)
- 9.30am-11.30am Noctua workbench hacking
- 11.30am lunch
pm
rm 257
- 1pm-2pm OPEN SESSION Intro to SPARQL (Eric)
- 2pm-3pm GO pipeline (Eric, Seth)
- 3pm-5pm hacking
evening
Nathan and Deepak arrive
wed
Nathan and Deepak arrive
Apollo breakout, rm 248
9.30am-11.30 deepak/nathan/suzi/EricY hacking
Noctua breakout, rm 258
9.30am-11.30 Seth/Tremayne/Eric hacking
11.30am lunch
1pm-5pm
deepak hanging out with group noctua hacking
thu
9.30am-11.30am
- deepak hacking with Eric D on ontobio
- tremayne hacking with anushya? rm248
11.30am lunch
pm
rm248
- 12-1 monarch group meeting
General session - all bbop group members should attend
may also invite Andrew, Marcin
- 2pm-4pm BBOP APIs and data models: Chris, Seth
- 4pm-5pm API discussion
evening
group dinner TBD
fri
open ended
am
rm 153
- Anushya and Tremayne meeting
pm
rm 248
Accommodations
You can get the lab rate and any of these hotels:
- http://travel.lbl.gov/air_car_hotel/preferred_hotels.html
- Closest hotel: http://www.fourpointssanfranciscobaybridge.com/ -- However, it is still 30 mins walk away
- The most pleasant option is to stay in downtown berkeley and get the lab shuttle in the morning. Others may be staying here: http://www.senshotelberkeley.com
- Non-lab employees may want to look on airbnb
Parking
Park temporarily and grab a parking pass from the person at the gate, you can then park in the garage:
Meeting Location
Berkeley Lab, Aquatic Park Offices
Lawrence Berkeley National Laboratory (LBNL), Aquatic Park office of Biosciences Operations at Berkeley Physical address: 717 Potter Street, Berkeley, CA 94710
Meeting room: room 181
Travel between hotel and meeting
- Walk, 1.3 miles
- Free Hollis Shuttle
- Taxi/Lyft/Uber
Aim to be at the lab for 9.30am
Participants
USC:
- Tremayne Mushayahama
- Anushya?
LBL:
- Chris Mungall
- Eric Douglass
- Seth Carbon
- HyeongSik Kim
- Suzi Lewis