Annotation Conf. Call 2018-04-10

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GOC Meeting, NYU, New York, NY, May 12-14th

  • Reminder to register, and reserve your hotel room before April 6th if staying at the Shelburne NYC
  • Logistics
  • Agenda

20th Anniversary GO Meeting, Montreal, Canada

  • Dates set for Oct 17-19

Annotation Survey

  • We are conducting a survey on annotation practices across the GOC
  • This will allow us to have a better overall view of different group's workflows, pipelines
  • Only need one response per annotation group
  • Would like results before the GOC meeting in NY
  • Please could each group respond by May 1st

Updates on Projects

MAPK Cascade

Extracellular Matrix

Canonical Wnt Signaling Pathway

  • Working on compiling annotations to review
  • Main issues:
    • Distinguishing gene products that are involved in canonical Wnt signaling vs +/- regulation of canonical Wnt signaling
    • Annotating to more granular child of Wnt signaling pathway when appropriate
    • Annotation of downstream targets to the canonical Wnt signaling pathway

Ontology Development and Annotation Review

Transcription factor refactoring

Annotation Review requests

  • There will be more annotations reviews to come in the upcoming days/weeks. For most the work load is expected to be small, a few proteins per group at the most.
  • Please let Pascale know if you are trying to annotate a function and cannot find the term - this will help decide whether some terms are missing or if we need to improve some term labels/definitions.


  • Next call tomorrow, Wednesday, April 11th at 11:00am EDT (see Google calendar)

Protein Complexes Working Group

  • Next call on Monday, April 23rd at 1:10pm EDT (see Google calendar)


  • On call: Chris, David H., Dustin, Harold, Helen, Karen, Kimberly, Li, Midori, Pascale, Paul T., Penelope, Petra, Sabrina, Sage, Stan, Suzi A., Tanya, Tom, Val

GOC Meeting, NYU, New York, NY, May 12-14th

Annotation Survey

Updates on Projects

MAPK Signaling

Extracellular Matrix Revisions

Wnt Signaling Pathway