Annotation Guidelines
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This is the new Annotation Guidelines page (to be completed & reviewed)
New proposed index page: https://docs.google.com/document/d/1UlAsmGOrEbpOaKlCApzdbvt48D_EMgA5gho5ptfTSvE/edit#
1. PROPOSAL TO REPLACE https://wiki.geneontology.org/Noctua#Noctua_Users_Manual
Noctua GO-CAM Editors
Noctua has four curation interfaces: 1) the Noctua Visual Editor, 2) the Noctua Form, 3) the Noctua Graph Editor, and the Annotation Review Tool.
- The Noctua Visual Editor (VPE) is designed for curating GO-CAM models, i.e. models that include at least two activities/MFs linked by causal relations.
- The Noctua Form is a structured annotation form that is recommended for creating 'standard' GO annotations.
- The Noctua Graph Editor is best suited for linking standard annotations together to create a causal model (GO-CAM).
- The Annotation Review tool
Getting started | ||
---|---|---|
Topic | Status | Last reviewed |
Noctua Landing Page | Draft | |
Browsing and searching annotations and models | Draft | |
Login | Current | 2022-05-13 |
Getting started | ||
Topic | Status | Last reviewed |
Noctua Visual Editor (VPE) | Current | 2022-05-05 |
Noctua Form | Draft | |
Noctua Graph Editor | Draft | |
Annotation Review Tool | Current | 2021-05-26 |
Form Editor | Molecular Function | |
---|---|---|
Biological Process | ||
Cellular Component | ||
Graph Editor | Molecular Function | |
Biological Process | ||
Cellular Component | ||
Adding contextual information (annotation extensions) | ||
Form Editor | Molecular Function | |
Biological Process | ||
Cellular Component | ||
Graph Editor | Molecular Function | |
Biological Process | ||
Cellular Component | ||
Editing annotations | ||
Form Editor | ||
Graph Editor | ||
Creating GO-CAMs | ||
Creating an activity unit | Form Editor | |
Graph Editor | ||
Linking Activities | Form Editor | |
Graph Editor | ||
Model metadata | ||
Model titles | General Guidelines | |
Form Editor | ||
Graph Editor | ||
Releasing models to production | Form Editor Form Editor] | |
Graph Editor | ||
Other tips and tricks | Adding a NOT qualifier to an annotation | |
Importing existing annotations | ||
Changing annotation group | ||
Model validation | ||
Running the reasoner | ||
Viewing GPAD export] | ||
Using templates |
Review Status
Draft: 2021-02-28 Patrick Masson, Pascale Gaudet