Annotation Guidelines

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 This is the new Annotation Guidelines page (to be completed & reviewed)

New proposed index page: https://docs.google.com/document/d/1UlAsmGOrEbpOaKlCApzdbvt48D_EMgA5gho5ptfTSvE/edit#

  1. PROPOSAL TO REPLACE https://wiki.geneontology.org/Noctua#Noctua_Users_Manual

Noctua GO-CAM Editors

Noctua has four curation interfaces: 1) the Noctua Visual Editor, 2) the Noctua Form, 3) the Noctua Graph Editor, and the Annotation Review Tool.

  • The Noctua Visual Editor (VPE) is designed for curating GO-CAM models, i.e. models that include at least two activities/MFs linked by causal relations.
  • The Noctua Form is a structured annotation form that is recommended for creating 'standard' GO annotations.
  • The Noctua Graph Editor is best suited for linking standard annotations together to create a causal model (GO-CAM).
  • The Annotation Review tool


Getting started
Topic Status Last reviewed
Noctua Landing Page Draft
Browsing and searching annotations and models Draft
Login Current 2022-05-13
Getting started
Topic Status Last reviewed
Noctua Visual Editor (VPE) Current 2022-05-05
Noctua Form Draft
Noctua Graph Editor Draft
Annotation Review Tool Current 2021-05-26
Form Editor Molecular Function
Biological Process
Cellular Component
Graph Editor Molecular Function
Biological Process
Cellular Component
Adding contextual information (annotation extensions)
Form Editor Molecular Function
Biological Process
Cellular Component
Graph Editor Molecular Function
Biological Process
Cellular Component
Editing annotations
Form Editor
Graph Editor
Creating GO-CAMs
Creating an activity unit Form Editor
Graph Editor
Linking Activities Form Editor
Graph Editor
Model metadata
Model titles General Guidelines
Form Editor
Graph Editor
Releasing models to production Form Editor Form Editor]
Graph Editor
Other tips and tricks Adding a NOT qualifier to an annotation
Importing existing annotations
Changing annotation group
Model validation
Running the reasoner
Viewing GPAD export]
Using templates

Review Status

Draft: 2021-02-28 Patrick Masson, Pascale Gaudet