Data Modeling and File Formats

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Project leads: Seth Carbon and Amelia Ireland


  • OWEG (obo format)
  • Annotation and Ref Genome Group (GAF)

OBO File Format

One of the tasks of the SWUG is to specify the OBO format used by the GO for the representation and exchange of the ontology. The current recommended format is 1.2. obof1.4 will be a backwards and forwards compatible change that will introduce additional tags and clarify obo/owl exchange.

Gene Association File (GAF) Format

The SWUG is in charge of specifying the tab-delimited file format used for the exchange of annotation data

See also: GAF

GO Database Schema

GO Rules Format

Representation of GO in OWL

Lego Proposal

  • TODO