MENGO Deconstruction
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Working group members:
- Biswarup Mukhopadhyay (Lead)
- Adam Book
- Garret Suen
Trudy 2/22/11(excerpts from 1st MENGO workshop)
- General ideas/terms proposed include:
All catabolic-related terms will have corresponding biosynthesis-related terms
Bolded italicised terms are currently missing in the Gene Ontology
GO:0016052 carbohydrate metabolic process GO:0005976 polysaccharide metabolic process GO:0000272 polysaccharide catabolic process GO:0005983 starch catabolic process GO:0030245 cellulose catabolic process hemicellulose catabolic process GO:0045493 xylan catabolic process GO:0046355 mannan catabolic process xyloglucan catabolic process GO:0045490 pectin catabolic process
2. Other areas to consider:
Degradation of storage carbohydrate
Degradation of organelle carbohydrate Degradation of plastids
3. Cross link breaking
backbone side chain
4. Soluble phenolics