OEWG 20100817

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OBO-Edit Working Group, Tuesday August 17th, 2010 9.30 a.m. PDT

Conference call details: New GOC conference call numbers
US: 1 866 953 9688
UK: 0808 238 6001
pin: 801561

Agenda/Chair: Amina
Minutes: Harold

Action items carried over

  • Feedback from the WG on pending/ required items for a full 2.1 release
  • Getting back to regular meeting cycle.

Bug and Feature Tracker Updates

Update on status of fix for this bug:

Loss of interesction status on merge

Discussion items

  • v2.1beta6
  • Alex: fatal errors in chebi - how to get around those.
    • Chris: change your verification settings.
    • DOS: I didn't realize fatal error settings could be changed. subset defs from headers etc.

subset def fatal error solution is to go add the defs there.

    • Alex: first 200 errors and then other errors come up
    • DOS: suggestion setting verification checks by namespace
    • Karen: profiles for errors for load and save - ppl
    • Chris: one shared profile for GO and one for chebi

use tag filer to get subsets and also pick up subset

    • merge bug. will be in beta 7
    • cell sucked in all the ancestor terms. part_of relationships
  • Chris: web environment called galaxy - generic and easy to plug in and make work flows.
    • http://berkeleybop.org/galaxy
    • easy to manage scripts that had to be managed before -
    • Chris: the main focus for me is going to be for term enrichment, annotation stuff and for people who can't install that yet.

Action Items

  • Amina:
    • Post to wiki a list of working versions of OBO-Edit.
    • beta7 updates


Back to OEWG Meeting agenda and minutes List