Oct2005 GO Ed report
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GO Editorial Office Report - October 2005
SourceForge items Items opened 75 Closed by editorial office 100 (note: no SF items closed outside GO-Ed. this month) In progress, assigned to editorial office 53 note: for several SF items, we are waiting for replies to messages sent to the mailing list See monthly report in CVS for ontology statistics. Content topics in progress: Development (Jen) morpogenesis Transporters (Jen) Examination of part_of relations in GO cellular component (Jane) Cellular component additions for MetaCyc (mainly Midori, also Jane) Reviewing Obol output for GO-Cell type integration (all, especially Midori & Amelia, with Chris M) Content topics resolved: Development (Jen) eye morphogenesis axon regeneration neurogenesis small things for SourceForge entries Very preliminary work towards making GO and Reactome more consistent (Midori, with Lisa Matthews) Conferences/meetings Proposals for content meeting (Amelia, Jane) self/non-self processes true path problems in cell death (Amelia) Organizing GO full day workshop for PAG 2006 (Jen) Paper published: Lomax J, The Gene Ontology Consortium Get ready to GO! A biologist's guide to the Gene Ontology. Brief Bioinform. 2005 ; 6: 298-304 PMID: 16212777 GO Survey put online; responses continuing to come in 1st week Nov; summary in next report Annotation outreach (Jen) Negotiating with Farm Animal people to get annotating group started in Europe. (This is now a draft proposal for chicken annotation from Dave Burt, under consideration by all groups.) Database Some updates to web pages Scripts (Amelia, Jen) Mailing list quiet again GO Bibliography now has 639 entries