Oct2010 ontology report
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Ontology Development Report - Oct 2010
I. Ontology Development
Tracker
- Items opened: 97
- Items closed: 127
- Items still open: 237
- assigned: 177
- unassigned: 60
Completed items
- Synchronized over 1500 reactions with MetaCyc, KEGG, RHEA and EC, and converted reaction text to reflect ChEBI names [Amelia]
- Various SourceForge items [all, but largely Midori]
Content items in progress
- Ongoing signaling proposals for top-level signaling terms [Becky and signaling WG]
- Continued submitting missing GOCHE terms to CHEBI, 225 remaining to add [Jane and Harold]
- Editing GOCHE [David, Harold, Jane, Midori, Tanya, Chris]
- Some cleaning-up of post-translational modification terms [Becky]
- Ongoing progress with transcription overhaul, 3 existing terms clarified, 37 new terms [Karen and David]
Publications
- GOCHE paper editing continues [David, Tanya, Jane, Chris, Midori, Harold]
- Heart development paper finished [David and Varsha]
Anything else
- Rebecca Foulger has joined GO Editorial Office team
- Organising signaling ontology workshop for Feb 2011 [Becky]
- Organising GOCHE meeting for Feb 2011 [David, Harold, Midori, Tanya, Chris]