Ontology meeting 2019-02-25

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Conference Line

See calendar for details



GOC Meeting Cambridge

  • GOC meeting - Cambridge, UK April 11th - 12th (right after ISB meeting)
    • Make sure you have signed up and let's start thinking about what we want to present.

David and Kimberly to NYC

  • David and Kimberly will visit Peter Thursday and Friday to discuss the Reactome imports and look closely at defining metabolic pathways using has_primary_input.
  • The new relations are now in the ontology.

Discussion topics

  • Getting rid of regulates_o_part_of: The plan going forward
  • Rob Hoehndorf preprint: "Formal axioms in biomedical ontologies improve analysis and interpretation of associated data"; analyzes GO-plus: https://www.biorxiv.org/content/10.1101/536649v1
  • Jim has created the file with about 3000 lines. David is reviewing them 1 by one.

Other business

On Call