Ontology meeting 2021-04-26
- Group members: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul, Eric
- Present: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul,
Don't hesitate to ping people if you expect something but don't see it yet - Rhea reaction requested in January was stuck in the Rhea pipeline - Anne unblocked it; it should be available in about 2 months since this is the UniProt release schedule.
UniProt SPARQL endpoint
For Chris - the UniProt SPARQL endpoint has some issue This is the right number: https://www.rhea-db.org/rhea?query=uniprot%3A* = 9,125 reactions mapped 221,135 Swiss-Prot entries (stats in SPARQL endpoint are not correct).
RHEA status and future plans
ACTION ITEM FROM LAST CALL
- Filter out Rhea xrefs that are not valid (Jim)
- Should obsolete ECs be removed from obsoleted terms Y/N